RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 SSTP61278 116 aa10.94□□□□□ -0.66
SS18-206ENST00000577572 SLAQ13239 276 aa10.94□□□□□ -0.66
SS18-206ENST00000577572 SBSPONQ8IVN8 264 aa10.94□□□□□ -0.66
SS18-206ENST00000577572 C14orf178Q8N769 122 aaPredicted RBP10.94□□□□□ -0.66
SS18-206ENST00000577572 EDA2RQ9HAV5 297 aa10.94□□□□□ -0.66
SS18-206ENST00000577572 TRAV4A0A0B4J268 109 aa10.93□□□□□ -0.66
SS18-206ENST00000577572 RAB5BP61020 215 aa10.93□□□□□ -0.66
SS18-206ENST00000577572 AMN1Q8IY45 258 aa10.93□□□□□ -0.66
SS18-206ENST00000577572 MRAPQ8TCY5 172 aa10.93□□□□□ -0.66
SS18-206ENST00000577572 B9D2Q9BPU9 175 aa10.93□□□□□ -0.66
SS18-206ENST00000577572 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
SS18-206ENST00000577572 U3KQK5 164 aa10.93□□□□□ -0.66
SS18-206ENST00000577572 SPART-AS1P0CW21 52 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 LINC00315P59091 139 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 CFAP126Q5VTH2 177 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 ORMDL3Q8N138 153 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 RNF185Q96GF1 192 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 ZMAT4Q9H898 229 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 DKK2Q9UBU2 259 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 MUC4Q99102 2169 aa10.92□□□□□ -0.66
SS18-206ENST00000577572 H7C1H1 209 aa10.91□□□□□ -0.66
SS18-206ENST00000577572 NHLRC4P0CG21 123 aaPredicted RBP10.91□□□□□ -0.66
SS18-206ENST00000577572 MRPL51Q4U2R6 128 aaKnown RBP10.91□□□□□ -0.66
SS18-206ENST00000577572 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
SS18-206ENST00000577572 Q6ZTI0 123 aa10.91□□□□□ -0.66
SS18-206ENST00000577572 OR4C5Q8NGB2 326 aa10.91□□□□□ -0.66
SS18-206ENST00000577572 TRGV2A0A075B6R0 118 aa10.9□□□□□ -0.66
SS18-206ENST00000577572 CKS2P33552 79 aa10.9□□□□□ -0.66
SS18-206ENST00000577572 ALKBH7Q9BT30 221 aaPredicted RBP10.9□□□□□ -0.66
SS18-206ENST00000577572 EMP1P54849 157 aa10.89□□□□□ -0.67
SS18-206ENST00000577572 OR10J3Q5JRS4 329 aa10.89□□□□□ -0.67
SS18-206ENST00000577572 FAM222AQ5U5X8 452 aa10.89□□□□□ -0.67
SS18-206ENST00000577572 A0A087WWL8 130 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 GAGE7O76087 117 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 Q0VG73 95 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 PRELID3AQ96N28 172 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 SAMD10Q9BYL1 202 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 JPT2Q9H910 190 aa10.88□□□□□ -0.67
SS18-206ENST00000577572 PRSS47A8MTI9 375 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 D6R8Y8 96 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BKO60814 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 IGHV3-53P01767 116 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BJP06899 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 MGPP08493 103 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BOP23527 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 SRIP30626 198 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BBP33778 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BDP58876 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BCP62807 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST2H2BEQ16778 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.87□□□□□ -0.67
SS18-206ENST00000577572 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BHQ93079 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BNQ99877 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 HIST1H2BMQ99879 126 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 C20orf78Q9BR46 151 aa10.87□□□□□ -0.67
SS18-206ENST00000577572 TRBV10-1A0A0K0K1A3 114 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 TRBV6-5A0A0K0K1A5 114 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 F5H697 171 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 M0QY20 66 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 ZNF56Q15929 161 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 RETNQ9HD89 108 aa10.86□□□□□ -0.67
SS18-206ENST00000577572 DAD1P61803 113 aa10.85□□□□□ -0.67
SS18-206ENST00000577572 RPL32P62910 135 aaKnown RBP10.85□□□□□ -0.67
SS18-206ENST00000577572 COA6Q5JTJ3 125 aaKnown RBP10.85□□□□□ -0.67
SS18-206ENST00000577572 DNAJC30Q96LL9 226 aa10.85□□□□□ -0.67
SS18-206ENST00000577572 TNFRSF6BO95407 300 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 DEFB130BP0DP73 79 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 DEFB130AP0DP74 79 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 DEFA6Q01524 100 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 NRACQ8N912 160 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 NIT2Q9NQR4 276 aa10.84□□□□□ -0.67
SS18-206ENST00000577572 K7EMI3 77 aa10.83□□□□□ -0.68
SS18-206ENST00000577572 ATP5G1P05496 136 aa10.83□□□□□ -0.68
SS18-206ENST00000577572 GATA1P15976 413 aaPredicted RBP10.83□□□□□ -0.68
SS18-206ENST00000577572 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
SS18-206ENST00000577572 MAP1LC3AQ9H492 121 aa10.83□□□□□ -0.68
SS18-206ENST00000577572 NBEAL2Q6ZNJ1 2754 aa10.82□□□□□ -0.68
SS18-206ENST00000577572 TRGV4A0A0C4DH28 118 aa10.82□□□□□ -0.68
SS18-206ENST00000577572 DEFB4AO15263 64 aa10.82□□□□□ -0.68
SS18-206ENST00000577572 FHL2Q14192 279 aa10.82□□□□□ -0.68
SS18-206ENST00000577572 NXT2Q9NPJ8 142 aaKnown RBP10.82□□□□□ -0.68
SS18-206ENST00000577572 TRAV26-2A0A0B4J265 109 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 A0A0J9YWU9 116 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 TCAPO15273 167 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 NCR2O95944 276 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 NPYP01303 97 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 S100A6P06703 90 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 SUMO2P61956 95 aaKnown RBP10.81□□□□□ -0.68
SS18-206ENST00000577572 RHOHQ15669 191 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
SS18-206ENST00000577572 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 294 ms