RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.94
RAB40B-204ENST00000571554 A0A0D9SG52 128 aa9.2□□□□□ -0.94
RAB40B-204ENST00000571554 TRBV6-1A0A0K0K1D8 114 aa9.2□□□□□ -0.94
RAB40B-204ENST00000571554 HMSDA8MTL9 139 aa9.2□□□□□ -0.94
RAB40B-204ENST00000571554 HAMPP81172 84 aa9.2□□□□□ -0.94
RAB40B-204ENST00000571554 PIK3CD-AS1Q5SR53 167 aa9.2□□□□□ -0.94
RAB40B-204ENST00000571554 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
RAB40B-204ENST00000571554 LRCOL1A6NCL2 159 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 UMAD1C9J7I0 102 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 PFDN1O60925 122 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 XGP55808 180 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
RAB40B-204ENST00000571554 SFRP2Q96HF1 295 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 TCEAL7Q9BRU2 100 aa9.19□□□□□ -0.94
RAB40B-204ENST00000571554 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
RAB40B-204ENST00000571554 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 RHODO00212 210 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 GCSHP23434 173 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 SSTP61278 116 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 PRR27Q6MZM9 219 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 TMUB2Q71RG4 321 aa9.18□□□□□ -0.94
RAB40B-204ENST00000571554 FAT1Q14517 4588 aa9.17□□□□□ -0.94
RAB40B-204ENST00000571554 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
RAB40B-204ENST00000571554 CCL20P78556 96 aa9.17□□□□□ -0.94
RAB40B-204ENST00000571554 WFDC2Q14508 124 aa9.17□□□□□ -0.94
RAB40B-204ENST00000571554 BAGE2Q86Y30 109 aa9.17□□□□□ -0.94
RAB40B-204ENST00000571554 ZFP82Q8N141 532 aa9.17□□□□□ -0.94
RAB40B-204ENST00000571554 EPM2AB3EWF7 344 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 LECT2O14960 151 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 Q8N814 137 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 OR10AG1Q8NH19 301 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 DERL1Q9BUN8 251 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
RAB40B-204ENST00000571554 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.94
RAB40B-204ENST00000571554 ZNF56Q15929 161 aa9.15□□□□□ -0.94
RAB40B-204ENST00000571554 MLST8Q9BVC4 326 aa9.15□□□□□ -0.94
RAB40B-204ENST00000571554 S100A9P06702 114 aaKnown RBP9.14□□□□□ -0.95
RAB40B-204ENST00000571554 RPL35P42766 123 aaKnown RBP9.14□□□□□ -0.95
RAB40B-204ENST00000571554 EIF5AP63241 154 aaKnown RBP9.14□□□□□ -0.95
RAB40B-204ENST00000571554 LAGE3Q14657 143 aa9.14□□□□□ -0.95
RAB40B-204ENST00000571554 BOLA1Q9Y3E2 137 aa9.14□□□□□ -0.95
RAB40B-204ENST00000571554 A0A087WWC5 75 aa9.13□□□□□ -0.95
RAB40B-204ENST00000571554 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
RAB40B-204ENST00000571554 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
RAB40B-204ENST00000571554 TM2D2Q9BX73 214 aa9.13□□□□□ -0.95
RAB40B-204ENST00000571554 URGCP-MRPS24S4R325 110 aa9.13□□□□□ -0.95
RAB40B-204ENST00000571554 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.12□□□□□ -0.95
RAB40B-204ENST00000571554 GZMBP10144 247 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 UBE2D3P61077 147 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 UBE2D2P62837 147 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 Q5VSD8 79 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 NIT1Q86X76 327 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
RAB40B-204ENST00000571554 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 KLK12Q9UKR0 248 aa9.12□□□□□ -0.95
RAB40B-204ENST00000571554 DNAH8Q96JB1 4490 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 SNAI2O43623 268 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 NEXN-AS1Q8NBZ9 246 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 BAALCQ8WXS3 180 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 TPPP3Q9BW30 176 aa9.11□□□□□ -0.95
RAB40B-204ENST00000571554 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 A0A087WX48 190 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 TRBV10-1A0A0K0K1A3 114 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 RAB19A4D1S5 217 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 RBFOX3A6NFN3 312 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 F5H697 171 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 CXCL1P09341 107 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 RAB4BP61018 213 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 TOR2AQ5JU69 321 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 C11orf52Q96A22 123 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 FAM30AQ9NZY2 134 aa9.1□□□□□ -0.95
RAB40B-204ENST00000571554 TMEM262E9PQX1 116 aa9.09□□□□□ -0.95
RAB40B-204ENST00000571554 IGLV2-8P01709 118 aa9.09□□□□□ -0.95
RAB40B-204ENST00000571554 OR5AL1P0C617 328 aa9.09□□□□□ -0.95
RAB40B-204ENST00000571554 LINC01620Q4KN68 170 aa9.09□□□□□ -0.95
RAB40B-204ENST00000571554 FRZBQ92765 325 aa9.09□□□□□ -0.95
RAB40B-204ENST00000571554 SSBP4Q9BWG4 385 aaPredicted RBP9.09□□□□□ -0.95
RAB40B-204ENST00000571554 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
RAB40B-204ENST00000571554 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
RAB40B-204ENST00000571554 SULT1A2P50226 295 aa9.08□□□□□ -0.96
RAB40B-204ENST00000571554 OR10G8Q8NGN5 311 aa9.08□□□□□ -0.96
RAB40B-204ENST00000571554 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
RAB40B-204ENST00000571554 TRBV6-8A0A0A6YYG3 113 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 MGPP08493 103 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 SMIM17P0DL12 118 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 GNG4P50150 75 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 RAB5CP51148 216 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 EIF5AL1Q6IS14 154 aaKnown RBP9.07□□□□□ -0.96
RAB40B-204ENST00000571554 KCNIP4Q6PIL6 250 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 TCTE3Q8IZS6 198 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 OR2D3Q8NGH3 330 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 DAZAP1Q96EP5 407 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms