RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SDHAF1A6NFY7 115 aa18.83■□□□□ 0.6
FANCA-221ENST00000566889 IGHV1-69P01742 117 aa18.83■□□□□ 0.6
FANCA-221ENST00000566889 M0R2P5 195 aa18.82■□□□□ 0.6
FANCA-221ENST00000566889 ELANEP08246 267 aa18.82■□□□□ 0.6
FANCA-221ENST00000566889 SMG1Q96Q15 3661 aaKnown RBP18.82■□□□□ 0.6
FANCA-221ENST00000566889 H3BT86 120 aa18.82■□□□□ 0.6
FANCA-221ENST00000566889 APRG1Q8IVJ8 170 aa18.82■□□□□ 0.6
FANCA-221ENST00000566889 MEIG1Q5JSS6 88 aa18.81■□□□□ 0.6
FANCA-221ENST00000566889 C2orf82Q6UX34 121 aa18.81■□□□□ 0.6
FANCA-221ENST00000566889 CUL9Q8IWT3 2517 aa18.81■□□□□ 0.6
FANCA-221ENST00000566889 FAM19A4Q96LR4 140 aa18.8■□□□□ 0.6
FANCA-221ENST00000566889 TMEM126AQ9H061 195 aa18.8■□□□□ 0.6
FANCA-221ENST00000566889 TRBV27A0A0K0K1C4 114 aa18.8■□□□□ 0.6
FANCA-221ENST00000566889 GNRH2O43555 120 aa18.8■□□□□ 0.6
FANCA-221ENST00000566889 C1orf122Q6ZSJ8 110 aa18.8■□□□□ 0.6
FANCA-221ENST00000566889 TRIAP1O43715 76 aa18.79■□□□□ 0.6
FANCA-221ENST00000566889 SUMO4Q6EEV6 95 aa18.79■□□□□ 0.6
FANCA-221ENST00000566889 TRBV6-5A0A0K0K1A5 114 aa18.78■□□□□ 0.6
FANCA-221ENST00000566889 ATP6V0E1O15342 81 aa18.78■□□□□ 0.6
FANCA-221ENST00000566889 PRO3102Q9H379 93 aa18.78■□□□□ 0.6
FANCA-221ENST00000566889 RNASE4P34096 147 aaKnown RBP18.78■□□□□ 0.6
FANCA-221ENST00000566889 FOXC1Q12948 553 aa18.77■□□□□ 0.6
FANCA-221ENST00000566889 TNFRSF18Q9Y5U5 241 aa18.77■□□□□ 0.6
FANCA-221ENST00000566889 DEFB121Q5J5C9 76 aa18.77■□□□□ 0.59
FANCA-221ENST00000566889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.76■□□□□ 0.59
FANCA-221ENST00000566889 WDFY4Q6ZS81 3184 aa18.76■□□□□ 0.59
FANCA-221ENST00000566889 COX6CP09669 75 aa18.76■□□□□ 0.59
FANCA-221ENST00000566889 RHOHQ15669 191 aa18.76■□□□□ 0.59
FANCA-221ENST00000566889 IGF2-ASQ6U949 168 aa18.76■□□□□ 0.59
FANCA-221ENST00000566889 TRBV7-7A0A0K0K1E9 115 aa18.75■□□□□ 0.59
FANCA-221ENST00000566889 H7C423 109 aa18.75■□□□□ 0.59
FANCA-221ENST00000566889 BEX4Q9NWD9 120 aaPredicted RBP18.75■□□□□ 0.59
FANCA-221ENST00000566889 ZNF22P17026 224 aaPredicted RBP18.74■□□□□ 0.59
FANCA-221ENST00000566889 NSUN5P1Q3KNT7 163 aa18.74■□□□□ 0.59
FANCA-221ENST00000566889 A0A0J9YXY3 114 aa18.74■□□□□ 0.59
FANCA-221ENST00000566889 SOCS3O14543 225 aa18.73■□□□□ 0.59
FANCA-221ENST00000566889 ICOSQ9Y6W8 199 aa18.73■□□□□ 0.59
FANCA-221ENST00000566889 SPANXDQ9BXN6 97 aa18.72■□□□□ 0.59
FANCA-221ENST00000566889 F5H697 171 aa18.72■□□□□ 0.59
FANCA-221ENST00000566889 ZNF56Q15929 161 aa18.71■□□□□ 0.59
FANCA-221ENST00000566889 NCOR1O75376 2440 aa18.7■□□□□ 0.58
FANCA-221ENST00000566889 RP1L1Q8IWN7 2480 aaPredicted RBP18.7■□□□□ 0.58
FANCA-221ENST00000566889 DCHS1Q96JQ0 3298 aa18.69■□□□□ 0.58
FANCA-221ENST00000566889 G3V318 75 aa18.69■□□□□ 0.58
FANCA-221ENST00000566889 DMXL2Q8TDJ6 3036 aa18.69■□□□□ 0.58
FANCA-221ENST00000566889 DEFB104AQ8WTQ1 72 aa18.69■□□□□ 0.58
FANCA-221ENST00000566889 TMEM101Q96IK0 257 aa18.68■□□□□ 0.58
FANCA-221ENST00000566889 IMUPQ9GZP8 106 aa18.68■□□□□ 0.58
FANCA-221ENST00000566889 SPANXCQ9NY87 97 aa18.68■□□□□ 0.58
FANCA-221ENST00000566889 UBE2E1P51965 193 aa18.67■□□□□ 0.58
FANCA-221ENST00000566889 DEFB124Q8NES8 71 aa18.67■□□□□ 0.58
FANCA-221ENST00000566889 LITAFQ99732 161 aa18.67■□□□□ 0.58
FANCA-221ENST00000566889 JPT2Q9H910 190 aa18.67■□□□□ 0.58
FANCA-221ENST00000566889 IGHV3-64A0A075B6Q5 118 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 A0A087WWL8 130 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 LINC01587Q99440 93 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 CHCHD5Q9BSY4 110 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 ZNF256Q9Y2P7 627 aaPredicted RBP18.66■□□□□ 0.58
FANCA-221ENST00000566889 WNK2Q9Y3S1 2297 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 LST1O00453 97 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 LY6DQ14210 128 aa18.66■□□□□ 0.58
FANCA-221ENST00000566889 OPRPNQ99935 248 aaPredicted RBP18.65■□□□□ 0.58
FANCA-221ENST00000566889 ARHGAP32A7KAX9 2087 aa18.65■□□□□ 0.58
FANCA-221ENST00000566889 FAM223BA6NKX1 122 aa18.65■□□□□ 0.58
FANCA-221ENST00000566889 ACYP1P07311 99 aa18.65■□□□□ 0.58
FANCA-221ENST00000566889 FAM223AQ8IWN6 122 aa18.65■□□□□ 0.58
FANCA-221ENST00000566889 MUC4Q99102 2169 aa18.64■□□□□ 0.58
FANCA-221ENST00000566889 IGHV3-30-3P0DP02 117 aa18.64■□□□□ 0.57
FANCA-221ENST00000566889 C20orf203Q8NBC4 194 aa18.64■□□□□ 0.57
FANCA-221ENST00000566889 TPRP12270 2363 aaKnown RBP18.64■□□□□ 0.57
FANCA-221ENST00000566889 A0A0J9YXV3 536 aa18.64■□□□□ 0.57
FANCA-221ENST00000566889 KLLNB2CW77 178 aa18.64■□□□□ 0.57
FANCA-221ENST00000566889 DEFB1P60022 68 aa18.63■□□□□ 0.57
FANCA-221ENST00000566889 DUX3Q96PT4 197 aa18.63■□□□□ 0.57
FANCA-221ENST00000566889 TIMM21Q9BVV7 248 aa18.63■□□□□ 0.57
FANCA-221ENST00000566889 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
FANCA-221ENST00000566889 NDUFA4O00483 81 aa18.62■□□□□ 0.57
FANCA-221ENST00000566889 BRI3O95415 125 aa18.62■□□□□ 0.57
FANCA-221ENST00000566889 PRSS2P07478 247 aa18.62■□□□□ 0.57
FANCA-221ENST00000566889 VPREB3Q9UKI3 123 aa18.62■□□□□ 0.57
FANCA-221ENST00000566889 IGLV4-3A0A075B6K6 122 aa18.61■□□□□ 0.57
FANCA-221ENST00000566889 TRGV11A0A075B6L2 103 aa18.61■□□□□ 0.57
FANCA-221ENST00000566889 LY6HO94772 140 aa18.61■□□□□ 0.57
FANCA-221ENST00000566889 POLEQ07864 2286 aa18.61■□□□□ 0.57
FANCA-221ENST00000566889 F6UB75 175 aa18.61■□□□□ 0.57
FANCA-221ENST00000566889 M0QY20 66 aa18.61■□□□□ 0.57
FANCA-221ENST00000566889 MIAQ16674 131 aa18.6■□□□□ 0.57
FANCA-221ENST00000566889 SIRPDQ9H106 197 aa18.59■□□□□ 0.57
FANCA-221ENST00000566889 YAE1D1Q9NRH1 226 aa18.59■□□□□ 0.57
FANCA-221ENST00000566889 I3L3M4 83 aa18.58■□□□□ 0.56
FANCA-221ENST00000566889 UNQ9165/PRO28630Q6UXU0 137 aa18.58■□□□□ 0.56
FANCA-221ENST00000566889 CLEC2BQ92478 149 aa18.58■□□□□ 0.56
FANCA-221ENST00000566889 ZNF580Q9UK33 172 aa18.58■□□□□ 0.56
FANCA-221ENST00000566889 FAM74A4Q5TZK3 123 aa18.57■□□□□ 0.56
FANCA-221ENST00000566889 LINC01560Q8TB33 94 aa18.57■□□□□ 0.56
FANCA-221ENST00000566889 SPXQ9BT56 116 aa18.57■□□□□ 0.56
FANCA-221ENST00000566889 ASPMQ8IZT6 3477 aa18.57■□□□□ 0.56
FANCA-221ENST00000566889 MRPS36P82909 103 aaKnown RBP18.57■□□□□ 0.56
FANCA-221ENST00000566889 IGHV1-58A0A0C4DH39 117 aa18.56■□□□□ 0.56
FANCA-221ENST00000566889 RPL11P62913 178 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms