RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 LINC00173Q6ZV60 143 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 PRIMA1Q86XR5 153 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 GATD1Q8NB37 220 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 TMEM18Q96B42 140 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 PRELID3AQ96N28 172 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 IGHV1OR15-1A0A075B7D0 117 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 TRAV2A0A0B4J234 112 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 TRAV25A0A0B4J276 109 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 IGHV3-16A0A0C4DH30 117 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 CBY3A6NI87 242 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
CHD9-217ENST00000565832 LINC00614P0C842 121 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 ESDP10768 282 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 AZU1P20160 251 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 TSPOP30536 169 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 STHQ8IWL8 128 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 ORMDL3Q8N138 153 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 DEFB125Q8N687 156 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 KCNS1Q96KK3 526 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 ODF3Q96PU9 254 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 U3KQK5 164 aa4.54□□□□□ -1.68
CHD9-217ENST00000565832 MGAM2Q2M2H8 2515 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 IGHV4-4A0A075B6R2 117 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 BTF3P20290 206 aaKnown RBP4.53□□□□□ -1.68
CHD9-217ENST00000565832 BEAN1Q3B7T3 259 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 PRSS3P2Q8NHM4 247 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 LINC01587Q99440 93 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 MCRIP2Q9BUT9 160 aaKnown RBP4.53□□□□□ -1.68
CHD9-217ENST00000565832 A8MTW9 85 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 HSBP1O75506 76 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 SCGB1D1O95968 90 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 KRTDAPP60985 99 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
CHD9-217ENST00000565832 GSN-AS1Q9NRJ2 163 aa4.53□□□□□ -1.68
CHD9-217ENST00000565832 IGHV3-73A0A0B4J1V6 119 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 IGHV1-24A0A0C4DH33 117 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 MGPP08493 103 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 IGLL1P15814 213 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 LINC00315P59091 139 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 JOSD1Q15040 202 aaPredicted RBP4.52□□□□□ -1.69
CHD9-217ENST00000565832 ZNF876PQ49A33 203 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 FAM74A4Q5TZK3 123 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 TRPT1Q86TN4 253 aaKnown RBP4.52□□□□□ -1.69
CHD9-217ENST00000565832 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 KIF25-AS1Q9Y6Z4 181 aa4.52□□□□□ -1.69
CHD9-217ENST00000565832 SMIM6P0DI80 62 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 CACNG7P62955 275 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 DNLZQ5SXM8 178 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 SPATA12Q7Z6I5 190 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 NRACQ8N912 160 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 TMEM208Q9BTX3 173 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 Q9UF83 564 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 A0A096LNJ9 63 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 H0Y8G0 127 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 TCAPO15273 167 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 C3orf79P0CE67 100 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 SMIM15Q7Z3B0 74 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 NEGR1Q7Z3B1 354 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 OR2K2Q8NGT1 345 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 RASL10AQ92737 203 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 TENM3Q9P273 2699 aa4.51□□□□□ -1.69
CHD9-217ENST00000565832 F5H697 171 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 CRYGDP07320 174 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 ATOH7Q8N100 152 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 Q8N976 141 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 C11orf72Q8NBR9 251 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 KRTAP17-1Q9BYP8 105 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 DPH3P1Q9H4G8 78 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 NXPH4O95158 308 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 INSP01308 110 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 MAJINQ3KP22 176 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 Q6ZSN1 163 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 FA2HQ7L5A8 372 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 CHCHD1Q96BP2 118 aaKnown RBP4.5□□□□□ -1.69
CHD9-217ENST00000565832 PRO1933Q9H354 126 aa4.5□□□□□ -1.69
CHD9-217ENST00000565832 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 PPBPP02775 128 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 SMIM17P0DL12 118 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 P0DMU3 169 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 FAM231AP0DMU4 169 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 FAM231CP0DMU5 169 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 CSNK1G2-AS1Q8NCQ2 148 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 AP1S3Q96PC3 154 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
CHD9-217ENST00000565832 MRPL16Q9NX20 251 aaKnown RBP4.49□□□□□ -1.69
CHD9-217ENST00000565832 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
CHD9-217ENST00000565832 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 C3orf56Q8N813 242 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 C18orf15Q96N68 181 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 MAP1LC3AQ9H492 121 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 TRGV11A0A075B6L2 103 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 EMP1P54849 157 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 ZNF56Q15929 161 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 990 ms