RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ATP5L2Q7Z4Y8 100 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 NIT1Q86X76 327 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 ZGRF1Q86YA3 2104 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 FDCSPQ8NFU4 85 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 OR4B1Q8NGF8 309 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 OR4P4Q8NGL7 312 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 OR4X1Q8NH49 305 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 SGMS2Q8NHU3 365 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 BORCS7Q96B45 105 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 GNB1LQ9BYB4 327 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 DYNLRB1Q9NP97 96 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 OSTCQ9NRP0 149 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 IL36BQ9NZH7 164 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 RPUSD1Q9UJJ7 312 aaKnown RBP2.23□□□□□ -2.05
LINC00560-201ENST00000564593 WASHC3Q9Y3C0 194 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 LAMA1P25391 3075 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 TNCP24821 2201 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 CADP27708 2225 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 ANKRD11Q6UB99 2663 aaPredicted RBP2.23□□□□□ -2.05
LINC00560-201ENST00000564593 ACACAQ13085 2346 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 LINC00587B1AMM8 73 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 ESDP10768 282 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 YPEL3P61236 119 aaPredicted RBP2.23□□□□□ -2.05
LINC00560-201ENST00000564593 UBE2G1P62253 170 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 RPL30P62888 115 aaKnown RBP2.23□□□□□ -2.05
LINC00560-201ENST00000564593 PLGLAQ15195 96 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 PMCHL1Q16048 86 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 LTC4SQ16873 150 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 DEFB109BQ30KR1 87 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 PYY3Q5JQD4 70 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 C10orf113Q5VZT2 155 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 Q6AWC8 147 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 Q6ZS92 163 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 ZNF826PQ6ZT77 177 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 FAM19A3Q7Z5A8 133 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 BAGE3Q86Y29 109 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 BAGE2Q86Y30 109 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 LINC00311Q8N616 119 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 SIGLECL1Q8N7X8 197 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 MGST2Q99735 147 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 VAMP8Q9BV40 100 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 NAT8BQ9UHF3 227 aa2.23□□□□□ -2.05
LINC00560-201ENST00000564593 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 ANKHD1Q8IWZ3 2542 aaKnown RBP2.22□□□□□ -2.05
LINC00560-201ENST00000564593 ICE1Q9Y2F5 2266 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 TCRBV4S1A1TA0A5B7 111 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 SMIM9A6NGZ8 99 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 DEFB108AA8MXU0 73 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 M0R143 59 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 PSCAO43653 123 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 REG1AP05451 166 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 LGALS3P17931 250 aaKnown RBP2.22□□□□□ -2.05
LINC00560-201ENST00000564593 ATP5G3P48201 142 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 ZNF137PP52743 207 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 MP68P56378 58 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 SMAGPQ0VAQ4 97 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 Q0VG73 95 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 RPL39P5Q59GN2 51 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 CENPWQ5EE01 88 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 PSMG4Q5JS54 123 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 IBA57Q5T440 356 aaKnown RBP2.22□□□□□ -2.05
LINC00560-201ENST00000564593 MIC13Q5XKP0 118 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 C5orf17Q8NAS9 161 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 DEFB124Q8NES8 71 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 TMEM167AQ8TBQ9 72 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 GAFA1Q96PS6 74 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 B9D2Q9BPU9 175 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 NABP2Q9BQ15 211 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 MRPL27Q9P0M9 148 aaKnown RBP2.22□□□□□ -2.05
LINC00560-201ENST00000564593 KAAG1Q9UBP8 84 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 VCANP13611 3396 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 EYSQ5T1H1 3165 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 USP9XQ93008 2570 aaPredicted RBP2.22□□□□□ -2.05
LINC00560-201ENST00000564593 NAV3Q8IVL0 2385 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 MALRD1Q5VYJ5 2156 aa2.22□□□□□ -2.05
LINC00560-201ENST00000564593 PRRC2CQ9Y520 2896 aaKnown RBP2.22□□□□□ -2.05
LINC00560-201ENST00000564593 TTC28Q96AY4 2481 aa2.21□□□□□ -2.05
LINC00560-201ENST00000564593 POLEQ07864 2286 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 EP300Q09472 2414 aaPredicted RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 TPRP12270 2363 aaKnown RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 IGKV1D-37A0A075B6S9 117 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 IGHV3OR15-7A0A075B7D8 119 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 TRAV30A0A087WSZ9 112 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF705FA8MVS1 300 aaPredicted RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 A8MWP6 167 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 HYPMO75409 117 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF705DP0CH99 300 aaPredicted RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 SAA1P0DJI8 122 aaPredicted RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 GZMBP10144 247 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 MGST1P10620 155 aaKnown RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 TCL1AP56279 114 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 SPINK9Q5DT21 86 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 C1orf194Q5T5A4 169 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 DOLPP1Q86YN1 238 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF439Q8NDP4 499 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 H1FXQ92522 213 aaKnown RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 TRGV9Q99603 122 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 C2orf88Q9BSF0 95 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms