RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 GAGE7O76087 117 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 APCSP02743 223 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 GAGE12FP0CL80 117 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 GAGE12GP0CL81 117 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 GAGE12IP0CL82 117 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 EVI2AP22794 236 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 ZNF56Q15929 161 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 FAM222AQ5U5X8 452 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
CLK3-214ENST00000564096 OR4C5Q8NGB2 326 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
CLK3-214ENST00000564096 DKK2Q9UBU2 259 aa9.18□□□□□ -0.94
CLK3-214ENST00000564096 DEFB4AO15263 64 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 NHLRC4P0CG21 123 aaPredicted RBP9.17□□□□□ -0.94
CLK3-214ENST00000564096 DAD1P61803 113 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 AMN1Q8IY45 258 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 LINC00612Q8N6U2 182 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 C18orf15Q96N68 181 aa9.17□□□□□ -0.94
CLK3-214ENST00000564096 A0A087WWL8 130 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 RS1O15537 224 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 DEFB130BP0DP73 79 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 DEFB130AP0DP74 79 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 FABP9Q0Z7S8 132 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 MRAP2Q96G30 205 aa9.16□□□□□ -0.94
CLK3-214ENST00000564096 F5H697 171 aa9.15□□□□□ -0.94
CLK3-214ENST00000564096 H7C1H1 209 aa9.15□□□□□ -0.94
CLK3-214ENST00000564096 PPBPP02775 128 aa9.15□□□□□ -0.94
CLK3-214ENST00000564096 SLAQ13239 276 aa9.15□□□□□ -0.94
CLK3-214ENST00000564096 A0A0J9YWU9 116 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 PPP1R17O96001 155 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 TRGC2P03986 189 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 CRYGDP07320 174 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 JPT2Q9H910 190 aa9.14□□□□□ -0.95
CLK3-214ENST00000564096 IGHV3-53P01767 116 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 RAB4AP20338 218 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 CKS2P33552 79 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 MRPL51Q4U2R6 128 aaKnown RBP9.13□□□□□ -0.95
CLK3-214ENST00000564096 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 SAMD10Q9BYL1 202 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 CELA1Q9UNI1 258 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 LAMTOR2Q9Y2Q5 125 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
CLK3-214ENST00000564096 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 TRGV4A0A0C4DH28 118 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 D6R8Y8 96 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 ATP5G1P05496 136 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 RAB5BP61020 215 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 UFSP1Q6NVU6 142 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 POM121L12Q8N7R1 296 aa9.12□□□□□ -0.95
CLK3-214ENST00000564096 SRIP30626 198 aa9.11□□□□□ -0.95
CLK3-214ENST00000564096 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
CLK3-214ENST00000564096 C11orf45Q8TAV5 145 aa9.11□□□□□ -0.95
CLK3-214ENST00000564096 ZNF479Q96JC4 524 aa9.11□□□□□ -0.95
CLK3-214ENST00000564096 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
CLK3-214ENST00000564096 EDA2RQ9HAV5 297 aa9.11□□□□□ -0.95
CLK3-214ENST00000564096 TRAV26-2A0A0B4J265 109 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 K7EQD1 137 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 PHOX2AO14813 284 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 NCR2O95944 276 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 LINC00315P59091 139 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 RHOHQ15669 191 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 U3KQK5 164 aa9.1□□□□□ -0.95
CLK3-214ENST00000564096 MUC4Q99102 2169 aa9.09□□□□□ -0.95
CLK3-214ENST00000564096 TRBV10-1A0A0K0K1A3 114 aa9.09□□□□□ -0.95
CLK3-214ENST00000564096 GATA1P15976 413 aaPredicted RBP9.09□□□□□ -0.95
CLK3-214ENST00000564096 PRADC1Q9BSG0 188 aa9.09□□□□□ -0.95
CLK3-214ENST00000564096 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
CLK3-214ENST00000564096 SMKR1H3BMG3 65 aa9.08□□□□□ -0.96
CLK3-214ENST00000564096 HTN3P15516 51 aa9.08□□□□□ -0.96
CLK3-214ENST00000564096 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
CLK3-214ENST00000564096 ALKBH7Q9BT30 221 aaPredicted RBP9.08□□□□□ -0.96
CLK3-214ENST00000564096 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
CLK3-214ENST00000564096 F5H768 121 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 M0QY20 66 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 DNAJC30Q96LL9 226 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 ST20Q9HBF5 79 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 PRO0255Q9UI72 69 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 TNFRSF18Q9Y5U5 241 aa9.07□□□□□ -0.96
CLK3-214ENST00000564096 NPYP01303 97 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 PMCHP20382 165 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 NANOS2P60321 138 aaKnown RBP9.06□□□□□ -0.96
CLK3-214ENST00000564096 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
CLK3-214ENST00000564096 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
CLK3-214ENST00000564096 FHL2Q14192 279 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 Q6ZTC4 211 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 NRACQ8N912 160 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
CLK3-214ENST00000564096 NIT2Q9NQR4 276 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 HHLA3Q9XRX5 114 aa9.06□□□□□ -0.96
CLK3-214ENST00000564096 TRAV10A0A0B4J240 114 aa9.05□□□□□ -0.96
CLK3-214ENST00000564096 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms