RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 A0A087WWL8 130 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 TMSB15BA0A087X1C1 80 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 RBFOX3A6NFN3 312 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 ARPC5O15511 151 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
CLN6-203ENST00000563917 HAMPP81172 84 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 ZNF726P1Q15940 193 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 DNLZQ5SXM8 178 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 DAZ4Q86SG3 579 aaKnown RBP6.36□□□□□ -1.39
CLN6-203ENST00000563917 C14orf178Q8N769 122 aaPredicted RBP6.36□□□□□ -1.39
CLN6-203ENST00000563917 Q8N976 141 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 ZC2HC1AQ96GY0 325 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 CHCHD7Q9BUK0 85 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 SAMD10Q9BYL1 202 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 JPT2Q9H910 190 aa6.36□□□□□ -1.39
CLN6-203ENST00000563917 DAZ3Q9NR90 486 aaKnown RBP6.36□□□□□ -1.39
CLN6-203ENST00000563917 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
CLN6-203ENST00000563917 TMEM262E9PQX1 116 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 J3QL48 77 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 LECT2O14960 151 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 PFDN1O60925 122 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 S100A9P06702 114 aaKnown RBP6.35□□□□□ -1.39
CLN6-203ENST00000563917 FHITP49789 147 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 UBE2WQ96B02 151 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 SFRP2Q96HF1 295 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 KLK12Q9UKR0 248 aa6.35□□□□□ -1.39
CLN6-203ENST00000563917 TRBV7-3A0A075B6L6 115 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 TRBV6-1A0A0K0K1D8 114 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 CRPP02741 224 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 LINC00694P0DN24 101 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 CRIP1P50238 77 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 PKIAP61925 76 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 Q0VG73 95 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 ZNF56Q15929 161 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 ZNF674Q2M3X9 581 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 RGS21Q2M5E4 152 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 LINC01559Q495D7 138 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 UFSP1Q6NVU6 142 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 NIT1Q86X76 327 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 BAALCQ8WXS3 180 aa6.34□□□□□ -1.39
CLN6-203ENST00000563917 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
CLN6-203ENST00000563917 UMAD1C9J7I0 102 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 F5H697 171 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 LTAP01374 205 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 SMIM17P0DL12 118 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 RAB4BP61018 213 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 Q8N3U1 123 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 SFT2D1Q8WV19 159 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 C1orf43Q9BWL3 253 aa6.33□□□□□ -1.4
CLN6-203ENST00000563917 ZNF471Q9BX82 626 aaPredicted RBP6.33□□□□□ -1.4
CLN6-203ENST00000563917 PAGE4O60829 102 aa6.32□□□□□ -1.4
CLN6-203ENST00000563917 EIF5AP63241 154 aaKnown RBP6.32□□□□□ -1.4
CLN6-203ENST00000563917 TMEM97Q5BJF2 176 aa6.32□□□□□ -1.4
CLN6-203ENST00000563917 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
CLN6-203ENST00000563917 BAGE2Q86Y30 109 aa6.32□□□□□ -1.4
CLN6-203ENST00000563917 FAM213BQ8TBF2 198 aa6.32□□□□□ -1.4
CLN6-203ENST00000563917 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
CLN6-203ENST00000563917 KANTRA0A1W2PQU2 76 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 UBE2D3P61077 147 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 UBE2D2P62837 147 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 WFDC2Q14508 124 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 PRR27Q6MZM9 219 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 LINC00528Q8N1L1 170 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 Q9UF83 564 aa6.31□□□□□ -1.4
CLN6-203ENST00000563917 TRBV6-8A0A0A6YYG3 113 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 A0A0D9SG52 128 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 A0A1B0GV50 99 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 TEX46H3BTG2 121 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 ANGP03950 147 aaKnown RBP6.3□□□□□ -1.4
CLN6-203ENST00000563917 CXCL1P09341 107 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 H2AFB1P0C5Y9 115 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 ZNF345Q14585 488 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 KCNRGQ8N5I3 272 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 OR10G8Q8NGN5 311 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 DEFB104AQ8WTQ1 72 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 DAZAP1Q96EP5 407 aaKnown RBP6.3□□□□□ -1.4
CLN6-203ENST00000563917 CYTL1Q9NRR1 136 aa6.3□□□□□ -1.4
CLN6-203ENST00000563917 SCO2A0A1W2PP80 73 aa6.29□□□□□ -1.4
CLN6-203ENST00000563917 SSTP61278 116 aa6.29□□□□□ -1.4
CLN6-203ENST00000563917 Q6ZSA8 131 aa6.29□□□□□ -1.4
CLN6-203ENST00000563917 C15orf54Q8N8G6 183 aa6.29□□□□□ -1.4
CLN6-203ENST00000563917 MBD3L1Q8WWY6 194 aa6.29□□□□□ -1.4
CLN6-203ENST00000563917 AP1S3Q96PC3 154 aa6.29□□□□□ -1.4
CLN6-203ENST00000563917 SMLR1H3BR10 107 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 H7C1H1 209 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 OR5AL1P0C617 328 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 RPL19P84098 196 aaKnown RBP6.28□□□□□ -1.4
CLN6-203ENST00000563917 MIAQ16674 131 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 TMUB2Q71RG4 321 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 SCXQ7RTU7 201 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 OR10AG1Q8NH19 301 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 CHAC1Q9BUX1 264 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 TPPP3Q9BW30 176 aa6.28□□□□□ -1.4
CLN6-203ENST00000563917 FLG2Q5D862 2391 aaPredicted RBP6.27□□□□□ -1.41
CLN6-203ENST00000563917 TRBV25-1A0A075B6N4 114 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms