RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 RASL10AQ92737 203 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 AP1S3Q96PC3 154 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 NOP10Q9NPE3 64 aaKnown RBP7.28□□□□□ -1.24
SMG1-208ENST00000563448 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 LINC00315P59091 139 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 Q6ZTI0 123 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 SMIM15Q7Z3B0 74 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 SBSPONQ8IVN8 264 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 Q8NAQ8 132 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 SAMD10Q9BYL1 202 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 DPH3P1Q9H4G8 78 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 TP53TG1Q9Y2A0 90 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 A0A087WWL8 130 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 TRGV1A0A0A0MS02 117 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 IGHV4-28A0A0C4DH34 117 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 TSTD3H0UI37 97 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 CRYGDP07320 174 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 MIFP14174 115 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 PKIAP61925 76 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 LGALS9BQ3B8N2 356 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BKO60814 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BJP06899 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BOP23527 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BBP33778 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 EMP1P54849 157 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BDP58876 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BCP62807 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST2H2BEQ16778 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BHQ93079 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BNQ99877 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 HIST1H2BMQ99879 126 aa7.27□□□□□ -1.25
SMG1-208ENST00000563448 A8MWV9 139 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 SMKR1H3BMG3 65 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 DEFB4AO15263 64 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 RS1O15537 224 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 MGPP08493 103 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 UFSP1Q6NVU6 142 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 POM121L12Q8N7R1 296 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 NDUFAF3Q9BU61 184 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 NBEAL2Q6ZNJ1 2754 aa7.26□□□□□ -1.25
SMG1-208ENST00000563448 D6R8Y8 96 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 SMIM17P0DL12 118 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 SRIP30626 198 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 FAM74A4Q5TZK3 123 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 CFAP126Q5VTH2 177 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 MRAPQ8TCY5 172 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 ALKBH7Q9BT30 221 aaPredicted RBP7.25□□□□□ -1.25
SMG1-208ENST00000563448 U3KQK5 164 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 GAGE12BA1L429 117 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 GAGE7O76087 117 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 NCR2O95944 276 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 LINC00612Q8N6U2 182 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 TM2D3Q9BRN9 247 aa7.25□□□□□ -1.25
SMG1-208ENST00000563448 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
SMG1-208ENST00000563448 GATA1P15976 413 aaPredicted RBP7.24□□□□□ -1.25
SMG1-208ENST00000563448 CKS2P33552 79 aa7.24□□□□□ -1.25
SMG1-208ENST00000563448 PYY3Q5JQD4 70 aa7.24□□□□□ -1.25
SMG1-208ENST00000563448 FAM222AQ5U5X8 452 aa7.24□□□□□ -1.25
SMG1-208ENST00000563448 ZNF56Q15929 161 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 ORMDL3Q8N138 153 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 OR4C5Q8NGB2 326 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 ZNF479Q96JC4 524 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 PRELID3AQ96N28 172 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 C2orf88Q9BSF0 95 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 DKK2Q9UBU2 259 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 LYRM9A8MSI8 78 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 DDTP30046 118 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 NDUFA6P56556 154 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 MRAP2Q96G30 205 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 C14orf144Q96I85 54 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 SPATA25Q9BR10 227 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 CELA1Q9UNI1 258 aa7.23□□□□□ -1.25
SMG1-208ENST00000563448 TRGV2A0A075B6R0 118 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 F5H697 171 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 NPYP01303 97 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 PPBPP02775 128 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 DEFB130BP0DP73 79 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 DEFB130AP0DP74 79 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 IQCJQ1A5X6 159 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 Q6ZSN1 163 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 NRACQ8N912 160 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 RHODO00212 210 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 Q0VG73 95 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 ZFP2Q6ZN57 461 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 RPL39LQ96EH5 51 aaKnown RBP7.22□□□□□ -1.25
SMG1-208ENST00000563448 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
SMG1-208ENST00000563448 M0QY20 66 aa7.21□□□□□ -1.26
SMG1-208ENST00000563448 TNFRSF6BO95407 300 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms