RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ZNF506Q5JVG8 444 aa11.14□□□□□ -0.63
HDGFL3-203ENST00000563404 CYB561D1Q8N8Q1 229 aa11.14□□□□□ -0.63
HDGFL3-203ENST00000563404 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
HDGFL3-203ENST00000563404 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
HDGFL3-203ENST00000563404 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 CIDEAO60543 219 aa11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 ATP6V0E2Q8NHE4 81 aa11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 FAM210AQ96ND0 272 aa11.13□□□□□ -0.63
HDGFL3-203ENST00000563404 PEX7O00628 323 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 GCGP01275 180 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 LAGE3Q14657 143 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 Q6ZSA8 131 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 C11orf52Q96A22 123 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 PTH2Q96A98 100 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 Q9UF83 564 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-203ENST00000563404 LINC00694P0DN24 101 aa11.11□□□□□ -0.63
HDGFL3-203ENST00000563404 FAT3Q8TDW7 4589 aa11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 LECT2O14960 151 aa11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 MGST1P10620 155 aaKnown RBP11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 SAPCD1Q5SSQ6 148 aa11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 FMC1Q96HJ9 113 aa11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
HDGFL3-203ENST00000563404 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 J3QL48 77 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 GAGE1Q13065 139 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 GAGE4Q13068 117 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 GAGE5Q13069 117 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 TM2D2Q9BX73 214 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 PARLQ9H300 379 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 MED9Q9NWA0 146 aa11.09□□□□□ -0.63
HDGFL3-203ENST00000563404 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 PRNTQ86SH4 94 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 EIF5A2Q9GZV4 153 aaKnown RBP11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 JPT2Q9H910 190 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
HDGFL3-203ENST00000563404 PEA15Q15121 130 aa11.07□□□□□ -0.64
HDGFL3-203ENST00000563404 LINC01620Q4KN68 170 aa11.07□□□□□ -0.64
HDGFL3-203ENST00000563404 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
HDGFL3-203ENST00000563404 LINC00479Q96M42 142 aa11.07□□□□□ -0.64
HDGFL3-203ENST00000563404 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
HDGFL3-203ENST00000563404 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 AKR1C3P42330 323 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 UBE2G1P62253 170 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 TOR2AQ5JU69 321 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 ZFP2Q6ZN57 461 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 DNAJC30Q96LL9 226 aa11.06□□□□□ -0.64
HDGFL3-203ENST00000563404 TRAV8-3A0A0A6YYJ7 113 aa11.05□□□□□ -0.64
HDGFL3-203ENST00000563404 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
HDGFL3-203ENST00000563404 LTAP01374 205 aa11.05□□□□□ -0.64
HDGFL3-203ENST00000563404 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
HDGFL3-203ENST00000563404 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
HDGFL3-203ENST00000563404 TRAV34A0A0B4J273 112 aa11.04□□□□□ -0.64
HDGFL3-203ENST00000563404 A8MWV9 139 aa11.04□□□□□ -0.64
HDGFL3-203ENST00000563404 RPL35P42766 123 aaKnown RBP11.04□□□□□ -0.64
HDGFL3-203ENST00000563404 MLST8Q9BVC4 326 aa11.04□□□□□ -0.64
HDGFL3-203ENST00000563404 SRP19P09132 144 aaKnown RBP11.03□□□□□ -0.64
HDGFL3-203ENST00000563404 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
HDGFL3-203ENST00000563404 PIK3CD-AS1Q5SR53 167 aa11.03□□□□□ -0.64
HDGFL3-203ENST00000563404 SCXQ7RTU7 201 aa11.03□□□□□ -0.64
HDGFL3-203ENST00000563404 Q86TA4 180 aa11.03□□□□□ -0.64
HDGFL3-203ENST00000563404 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
HDGFL3-203ENST00000563404 LINC00862A6NCI5 91 aa11.02□□□□□ -0.65
HDGFL3-203ENST00000563404 S100A4P26447 101 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-203ENST00000563404 KRTAP10-4P60372 401 aaPredicted RBP11.02□□□□□ -0.65
HDGFL3-203ENST00000563404 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
HDGFL3-203ENST00000563404 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
HDGFL3-203ENST00000563404 ASIPP42127 132 aa11.01□□□□□ -0.65
HDGFL3-203ENST00000563404 CRIP1P50238 77 aa11.01□□□□□ -0.65
HDGFL3-203ENST00000563404 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
HDGFL3-203ENST00000563404 IL36BQ9NZH7 164 aa11.01□□□□□ -0.65
HDGFL3-203ENST00000563404 A0A087WWC5 75 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 FABP5P3A8MUU1 101 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 H3BVH4 76 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 GNG4P50150 75 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 NIT1Q86X76 327 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 DERL1Q9BUN8 251 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 BIN3Q9NQY0 253 aa11□□□□□ -0.65
HDGFL3-203ENST00000563404 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
HDGFL3-203ENST00000563404 B4DEV8 164 aa10.99□□□□□ -0.65
HDGFL3-203ENST00000563404 SRSF3P84103 164 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-203ENST00000563404 IGKV2D-24A0A075B6R9 120 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms