RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 USP24Q9UPU5 2620 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 EMP1P54849 157 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 SRSF2Q01130 221 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 LY6G5BQ8NDX9 201 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 CFHR4Q92496 578 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 IGHV3-33P01772 117 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 ERCC8Q13216 396 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
GTF3C1-203ENST00000562609 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 CRYGBP07316 175 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 DYNAPQ8N1N2 210 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 EPG5Q9HCE0 2579 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 ZNF462Q96JM2 2506 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 A4D1N5 150 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 BEX4Q9NWD9 120 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-203ENST00000562609 SMIM9A6NGZ8 99 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 OOSP1A8MZH6 123 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 K7EIM0 57 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 MRPL23Q16540 153 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 Q1RN00 199 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 DOPEY1Q5JWR5 2465 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 DPM3Q9P2X0 92 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■■□□□ 14.2
GTF3C1-203ENST00000562609 IGKV3D-20A0A0C4DH25 116 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 C9orf153Q5TBE3 101 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 VMO1Q7Z5L0 202 aa10.66□□□□□ -0.7
GTF3C1-203ENST00000562609 P0DMU3 169 aa10.65□□□□□ -0.7
GTF3C1-203ENST00000562609 FAM231AP0DMU4 169 aa10.65□□□□□ -0.7
GTF3C1-203ENST00000562609 FAM231CP0DMU5 169 aa10.65□□□□□ -0.7
GTF3C1-203ENST00000562609 TSPEAR-AS2P59090 65 aa10.65□□□□□ -0.7
GTF3C1-203ENST00000562609 HERVK_113P61574 105 aa10.65□□□□□ -0.7
GTF3C1-203ENST00000562609 USP9YO00507 2555 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-203ENST00000562609 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.71
GTF3C1-203ENST00000562609 PF4V1P10720 104 aa10.65□□□□□ -0.71
GTF3C1-203ENST00000562609 BPESC1Q9GZL8 116 aa10.65□□□□□ -0.71
GTF3C1-203ENST00000562609 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.71
GTF3C1-203ENST00000562609 FAM236AA0A1B0GUQ0 79 aa10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 FAM236BA0A1B0GV22 79 aa10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 NPFFO15130 113 aa10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-203ENST00000562609 M0R2P5 195 aa10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 NDUFA7O95182 113 aa10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 FAM19A5Q7Z5A7 132 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 DUX3Q96PT4 197 aa10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 CSPG4Q6UVK1 2322 aa10.63□□□□□ -0.71
GTF3C1-203ENST00000562609 TRBV7-7A0A0K0K1E9 115 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 PRAC2D3DTV9 90 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 CRYGDP07320 174 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 IGHV7-4-1A0A0J9YVY3 117 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 NBR2O15453 112 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 HERVK_113P63121 156 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 CEMP1Q6PRD7 247 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
GTF3C1-203ENST00000562609 ZANQ9Y493 2812 aa10.61□□□□□ -0.71
GTF3C1-203ENST00000562609 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
GTF3C1-203ENST00000562609 PMVKQ15126 192 aa10.61□□□□□ -0.71
GTF3C1-203ENST00000562609 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
GTF3C1-203ENST00000562609 ODF3BA8MYP8 253 aa10.61□□□□□ -0.71
GTF3C1-203ENST00000562609 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
GTF3C1-203ENST00000562609 IGHV3OR16-10A0A075B7F0 116 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 J3KT08 172 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 M0R1W7 72 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 SMAD5-AS1Q9Y6J3 95 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 NDPQ00604 133 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
GTF3C1-203ENST00000562609 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 IGHV3-23P01764 117 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 ZNF22P17026 224 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 EBI3Q14213 229 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 H7C423 109 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 TRIAP1O43715 76 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 PRB1P04280 392 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 ABCA12Q86UK0 2595 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 POM121L12Q8N7R1 296 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 AMELXQ99217 191 aa10.59□□□□□ -0.71
GTF3C1-203ENST00000562609 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 J3QQQ9 107 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 LGALS3P17931 250 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 RNF182Q8N6D2 247 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms