RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 KRTAP1-5Q9BYS1 174 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 OR5AL1P0C617 328 aa13.65□□□□□ -0.22
TSPAN3-210ENST00000561277 C14orf178Q8N769 122 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-210ENST00000561277 SSBP4Q9BWG4 385 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-210ENST00000561277 K7EN84 100 aa13.64□□□□□ -0.23
TSPAN3-210ENST00000561277 CRYGDP07320 174 aa13.64□□□□□ -0.23
TSPAN3-210ENST00000561277 RPS20P60866 119 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-210ENST00000561277 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
TSPAN3-210ENST00000561277 FAT2Q9NYQ8 4349 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 BIRC6Q9NR09 4857 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 PRSS29PA6NIE9 313 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 GAGE1Q13065 139 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 GAGE4Q13068 117 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 GAGE5Q13069 117 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 WFDC10BQ8IUB3 73 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 C6orf223Q8N319 242 aa13.63□□□□□ -0.23
TSPAN3-210ENST00000561277 FER1L6-AS1Q8NA97 138 aa13.62□□□□□ -0.23
TSPAN3-210ENST00000561277 NUDT10Q8NFP7 164 aa13.62□□□□□ -0.23
TSPAN3-210ENST00000561277 NUDT11Q96G61 164 aa13.62□□□□□ -0.23
TSPAN3-210ENST00000561277 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-210ENST00000561277 Q9UF83 564 aa13.62□□□□□ -0.23
TSPAN3-210ENST00000561277 XKRY2A2RUG3 117 aa13.62□□□□□ -0.23
TSPAN3-210ENST00000561277 HECTD4Q9Y4D8 3996 aa13.61□□□□□ -0.23
TSPAN3-210ENST00000561277 IGLC6P0CF74 106 aa13.61□□□□□ -0.23
TSPAN3-210ENST00000561277 ATP6V0E2Q8NHE4 81 aa13.61□□□□□ -0.23
TSPAN3-210ENST00000561277 SMIM7Q9BQ49 75 aa13.61□□□□□ -0.23
TSPAN3-210ENST00000561277 A0A1W2PPQ1 181 aa13.6□□□□□ -0.23
TSPAN3-210ENST00000561277 ZNF56Q15929 161 aa13.6□□□□□ -0.23
TSPAN3-210ENST00000561277 SRP19P09132 144 aaKnown RBP13.59□□□□□ -0.23
TSPAN3-210ENST00000561277 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
TSPAN3-210ENST00000561277 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
TSPAN3-210ENST00000561277 TIRAPP58753 221 aa13.58□□□□□ -0.23
TSPAN3-210ENST00000561277 AP1S3Q96PC3 154 aa13.58□□□□□ -0.23
TSPAN3-210ENST00000561277 ZNF727A8MUV8 499 aa13.58□□□□□ -0.24
TSPAN3-210ENST00000561277 LINC00694P0DN24 101 aa13.58□□□□□ -0.24
TSPAN3-210ENST00000561277 GTSF1LQ9H1H1 148 aa13.58□□□□□ -0.24
TSPAN3-210ENST00000561277 NDUFS6O75380 124 aaKnown RBP13.57□□□□□ -0.24
TSPAN3-210ENST00000561277 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
TSPAN3-210ENST00000561277 OR10J3Q5JRS4 329 aa13.57□□□□□ -0.24
TSPAN3-210ENST00000561277 LYZL1Q6UWQ5 148 aa13.57□□□□□ -0.24
TSPAN3-210ENST00000561277 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
TSPAN3-210ENST00000561277 F5H697 171 aa13.56□□□□□ -0.24
TSPAN3-210ENST00000561277 LINC00315P59091 139 aa13.56□□□□□ -0.24
TSPAN3-210ENST00000561277 MSRB1Q9NZV6 116 aa13.56□□□□□ -0.24
TSPAN3-210ENST00000561277 F2Z2F3 143 aa13.55□□□□□ -0.24
TSPAN3-210ENST00000561277 RAB4BP61018 213 aa13.55□□□□□ -0.24
TSPAN3-210ENST00000561277 CACNG7P62955 275 aa13.55□□□□□ -0.24
TSPAN3-210ENST00000561277 LELP1Q5T871 98 aa13.55□□□□□ -0.24
TSPAN3-210ENST00000561277 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 IGHV3-38A0A0C4DH36 116 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 A0A1B0GVY2 172 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 GATCO43716 136 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 DNAH10OSP0CZ25 163 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 EVI2AP22794 236 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 TNP2Q05952 138 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 LINC01551Q86U37 167 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 TRAV9-2A0A087WT02 112 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 RPL36AP83881 106 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 RPL36ALQ969Q0 106 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 KIF25-AS1Q9Y6Z4 181 aa13.54□□□□□ -0.24
TSPAN3-210ENST00000561277 C9JQL5 133 aa13.53□□□□□ -0.24
TSPAN3-210ENST00000561277 MGPP08493 103 aa13.53□□□□□ -0.24
TSPAN3-210ENST00000561277 CTRLP40313 264 aa13.53□□□□□ -0.24
TSPAN3-210ENST00000561277 PEA15Q15121 130 aa13.53□□□□□ -0.24
TSPAN3-210ENST00000561277 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
TSPAN3-210ENST00000561277 NTF3P20783 257 aa13.52□□□□□ -0.25
TSPAN3-210ENST00000561277 TNFRSF18Q9Y5U5 241 aa13.52□□□□□ -0.25
TSPAN3-210ENST00000561277 TRBV7-3A0A075B6L6 115 aa13.51□□□□□ -0.25
TSPAN3-210ENST00000561277 TWIST1Q15672 202 aa13.5□□□□□ -0.25
TSPAN3-210ENST00000561277 NEXN-AS1Q8NBZ9 246 aa13.5□□□□□ -0.25
TSPAN3-210ENST00000561277 GTSF1Q8WW33 167 aa13.5□□□□□ -0.25
TSPAN3-210ENST00000561277 PKHD1P08F94 4074 aa13.5□□□□□ -0.25
TSPAN3-210ENST00000561277 IGHV3-30P01768 117 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 TRGC1P0CF51 173 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 IGHV3-30-3P0DP02 117 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 IGHV3-30-5P0DP03 117 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 UBE2D3P61077 147 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 UBE2D2P62837 147 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 LINC01556Q5JQF7 62 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 PKD1P98161 4303 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 A0A087WWC5 75 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 A8MWL6 223 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 FAM74A3Q4VXF1 159 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 OR10G8Q8NGN5 311 aa13.49□□□□□ -0.25
TSPAN3-210ENST00000561277 K7EP13 123 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 RAB14P61106 215 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 CT83Q5H943 113 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 C10orf126Q8N4M7 172 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 PGLYRP4Q96LB8 373 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 CNFNQ9BYD5 112 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
TSPAN3-210ENST00000561277 SUMO4Q6EEV6 95 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms