RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RAB11AP62491 216 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 RBX1P62877 108 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 MLLT11Q13015 90 aaPredicted RBP2.06□□□□□ -2.08
HERC1-211ENST00000560983 SS18Q15532 418 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 ZNF506Q5JVG8 444 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 TMEM78Q5T7P6 136 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 IZUMO2Q6UXV1 221 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 ZFP2Q6ZN57 461 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 LINC00337Q8N6G1 96 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 RAB2BQ8WUD1 216 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 C9orf16Q9BUW7 83 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 PARLQ9H300 379 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 SLC39A9Q9NUM3 307 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 TRAV8-4A0A0B4J246 113 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 EIF3GO75821 320 aaKnown RBP eCLIP2.05□□□□□ -2.08
HERC1-211ENST00000560983 P01737 135 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 GZMBP10144 247 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 HIST1H1EP10412 219 aaKnown RBP2.05□□□□□ -2.08
HERC1-211ENST00000560983 IAPPP10997 89 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 MYL9P24844 172 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 UBE2D3P61077 147 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 SELENOTP62341 195 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 UBE2D2P62837 147 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 AKR1C1Q04828 323 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 REG3AQ06141 175 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
HERC1-211ENST00000560983 C1orf146Q5VVC0 180 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 C22orf42Q6IC83 251 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 PRSS48Q7RTY5 328 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 S100A7AQ86SG5 101 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 OR2G3Q8NGZ4 309 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 TYMSOSQ8TAI1 123 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 GPX8Q8TED1 209 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 KCNS1Q96KK3 526 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 RTBDNQ9BSG5 229 aaPredicted RBP2.05□□□□□ -2.08
HERC1-211ENST00000560983 JPT2Q9H910 190 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 COPZ2Q9P299 210 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 NAGKQ9UJ70 344 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 PAIP2BQ9ULR5 123 aaKnown RBP2.05□□□□□ -2.08
HERC1-211ENST00000560983 RNF24Q9Y225 148 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 PRELID1Q9Y255 219 aa2.05□□□□□ -2.08
HERC1-211ENST00000560983 A0A087WZ39 114 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 GVQW2A0A096LPI5 108 aaPredicted RBP2.04□□□□□ -2.08
HERC1-211ENST00000560983 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 RNASE3P12724 160 aaKnown RBP2.04□□□□□ -2.08
HERC1-211ENST00000560983 CAV2P51636 162 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 EIF5AP63241 154 aaKnown RBP2.04□□□□□ -2.08
HERC1-211ENST00000560983 SMCO1Q147U7 214 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 CFAP161Q6P656 301 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 NTM-AS1Q6ZSK4 140 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 LYZL2Q7Z4W2 148 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 C20orf203Q8NBC4 194 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 CCDC197Q8NCU1 140 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 NAA50Q9GZZ1 169 aaKnown RBP2.04□□□□□ -2.08
HERC1-211ENST00000560983 MIXL1Q9H2W2 232 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 NAA60Q9H7X0 242 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 WFDC1Q9HC57 220 aa2.04□□□□□ -2.08
HERC1-211ENST00000560983 TRBV7-3A0A075B6L6 115 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 A8MWV9 139 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 WRBO00258 174 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 PTTG1O95997 202 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 PRSS3P35030 304 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 RAB2AP61019 212 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 CTAG1AP78358 180 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 SLC38A11Q08AI6 406 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 C10orf113Q5VZT2 155 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 OR51S1Q8NGJ8 323 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 TERB2Q8NHR7 220 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 ZFAND1Q8TCF1 268 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 TSKUQ8WUA8 353 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 ASB13Q8WXK3 278 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 TVP23CQ96ET8 276 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 LINC00526Q96FQ7 95 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 ATP5SQ99766 215 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 CHCHD5Q9BSY4 110 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 NDUFB11Q9NX14 153 aa2.03□□□□□ -2.08
HERC1-211ENST00000560983 IGLV4-60A0A075B6I1 120 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 TRAV21A0A0B4J279 112 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 A0A0B4J2A0 478 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 TRBV10-1A0A0K0K1A3 114 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 SMCO3A2RU48 225 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 AGPAT2O15120 278 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 ZNF861PO60384 105 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 COX7A2P2O60397 106 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 PYYP10082 97 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 AKR1C4P17516 323 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 SDC2P34741 201 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 PDE6HQ13956 83 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 SPANXN5Q5MJ07 72 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
HERC1-211ENST00000560983 C8orf59Q8N0T1 100 aaPredicted RBP2.02□□□□□ -2.09
HERC1-211ENST00000560983 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 OR11H4Q8NGC9 324 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 S100A16Q96FQ6 103 aaKnown RBP2.02□□□□□ -2.09
HERC1-211ENST00000560983 NPVFQ9HCQ7 196 aa2.02□□□□□ -2.09
HERC1-211ENST00000560983 TXNL4BQ9NX01 149 aaKnown RBP2.02□□□□□ -2.09
HERC1-211ENST00000560983 ANAPC11Q9NYG5 84 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms