RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 JPT2Q9H910 190 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
TPM1-224ENST00000560615 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
TPM1-224ENST00000560615 RBFOX3A6NFN3 312 aa12.26□□□□□ -0.45
TPM1-224ENST00000560615 RPL36AP83881 106 aaKnown RBP12.26□□□□□ -0.45
TPM1-224ENST00000560615 ZNF726P1Q15940 193 aa12.26□□□□□ -0.45
TPM1-224ENST00000560615 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
TPM1-224ENST00000560615 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.26□□□□□ -0.45
TPM1-224ENST00000560615 RPL36ALQ969Q0 106 aaKnown RBP12.26□□□□□ -0.45
TPM1-224ENST00000560615 ZC2HC1AQ96GY0 325 aa12.26□□□□□ -0.45
TPM1-224ENST00000560615 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
TPM1-224ENST00000560615 IGKV2D-24A0A075B6R9 120 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 LECT2O14960 151 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 SH2D1AO60880 128 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 Q5BKY6 102 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 NIT1Q86X76 327 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 BAALCQ8WXS3 180 aa12.25□□□□□ -0.45
TPM1-224ENST00000560615 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
TPM1-224ENST00000560615 M0R381 172 aa12.24□□□□□ -0.45
TPM1-224ENST00000560615 FHITP49789 147 aa12.24□□□□□ -0.45
TPM1-224ENST00000560615 Q0VG73 95 aa12.24□□□□□ -0.45
TPM1-224ENST00000560615 Q8N3U1 123 aa12.24□□□□□ -0.45
TPM1-224ENST00000560615 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
TPM1-224ENST00000560615 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
TPM1-224ENST00000560615 FAT1Q14517 4588 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 A0A087WWL8 130 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 TRBV6-1A0A0K0K1D8 114 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 CRIP1P50238 77 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 WFDC2Q14508 124 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 CST9LP1Q5W188 147 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 Q6ZSA8 131 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
TPM1-224ENST00000560615 AKR1C3P42330 323 aa12.22□□□□□ -0.45
TPM1-224ENST00000560615 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
TPM1-224ENST00000560615 C14orf177Q52M58 125 aa12.22□□□□□ -0.45
TPM1-224ENST00000560615 LINC00528Q8N1L1 170 aa12.22□□□□□ -0.45
TPM1-224ENST00000560615 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
TPM1-224ENST00000560615 HERC1Q15751 4861 aa12.22□□□□□ -0.45
TPM1-224ENST00000560615 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.45
TPM1-224ENST00000560615 TMSB15BA0A087X1C1 80 aa12.21□□□□□ -0.45
TPM1-224ENST00000560615 S100A9P06702 114 aaKnown RBP12.21□□□□□ -0.45
TPM1-224ENST00000560615 PKIAP61925 76 aa12.21□□□□□ -0.45
TPM1-224ENST00000560615 Q9UF83 564 aa12.21□□□□□ -0.45
TPM1-224ENST00000560615 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
TPM1-224ENST00000560615 LTAP01374 205 aa12.2□□□□□ -0.46
TPM1-224ENST00000560615 CRPP02741 224 aa12.19□□□□□ -0.46
TPM1-224ENST00000560615 ARPC5O15511 151 aa12.18□□□□□ -0.46
TPM1-224ENST00000560615 RAB4BP61018 213 aa12.18□□□□□ -0.46
TPM1-224ENST00000560615 UBE2D3P61077 147 aa12.18□□□□□ -0.46
TPM1-224ENST00000560615 UBE2D2P62837 147 aa12.18□□□□□ -0.46
TPM1-224ENST00000560615 C1orf43Q9BWL3 253 aa12.18□□□□□ -0.46
TPM1-224ENST00000560615 PFDN1O60925 122 aa12.17□□□□□ -0.46
TPM1-224ENST00000560615 ZNF56Q15929 161 aa12.17□□□□□ -0.46
TPM1-224ENST00000560615 TMEM97Q5BJF2 176 aa12.17□□□□□ -0.46
TPM1-224ENST00000560615 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
TPM1-224ENST00000560615 ZNF471Q9BX82 626 aaPredicted RBP12.17□□□□□ -0.46
TPM1-224ENST00000560615 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
TPM1-224ENST00000560615 CXCL1P09341 107 aa12.16□□□□□ -0.46
TPM1-224ENST00000560615 ATRAIDQ6UW56 229 aa12.16□□□□□ -0.46
TPM1-224ENST00000560615 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
TPM1-224ENST00000560615 KRTAP29-1A8MX34 341 aaPredicted RBP12.15□□□□□ -0.46
TPM1-224ENST00000560615 PAGE4O60829 102 aa12.15□□□□□ -0.46
TPM1-224ENST00000560615 SCXQ7RTU7 201 aa12.15□□□□□ -0.46
TPM1-224ENST00000560615 VPS13BQ7Z7G8 4022 aa12.14□□□□□ -0.47
TPM1-224ENST00000560615 UMAD1C9J7I0 102 aa12.14□□□□□ -0.47
TPM1-224ENST00000560615 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
TPM1-224ENST00000560615 SFT2D1Q8WV19 159 aa12.14□□□□□ -0.47
TPM1-224ENST00000560615 F5H697 171 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 ANGP03950 147 aaKnown RBP12.13□□□□□ -0.47
TPM1-224ENST00000560615 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 BAGE2Q86Y30 109 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 CHCHD5Q9BSY4 110 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 CYTL1Q9NRR1 136 aa12.13□□□□□ -0.47
TPM1-224ENST00000560615 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
TPM1-224ENST00000560615 SRRM2Q9UQ35 2752 aaKnown RBP12.12□□□□□ -0.47
TPM1-224ENST00000560615 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 MIAQ16674 131 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 RGS21Q2M5E4 152 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 NEXN-AS1Q8NBZ9 246 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 OR10AG1Q8NH19 301 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 FAM213BQ8TBF2 198 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
TPM1-224ENST00000560615 SNAI2O43623 268 aa12.1□□□□□ -0.47
TPM1-224ENST00000560615 EIF5AP63241 154 aaKnown RBP12.1□□□□□ -0.47
TPM1-224ENST00000560615 ZNF345Q14585 488 aa12.1□□□□□ -0.47
TPM1-224ENST00000560615 PRR27Q6MZM9 219 aa12.1□□□□□ -0.47
TPM1-224ENST00000560615 MYCBP2O75592 4640 aa12.09□□□□□ -0.47
TPM1-224ENST00000560615 IGLV2-8P01709 118 aa12.09□□□□□ -0.47
TPM1-224ENST00000560615 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
TPM1-224ENST00000560615 ENHOQ6UWT2 76 aa12.09□□□□□ -0.47
TPM1-224ENST00000560615 CIRBP-AS1Q8TBR5 109 aa12.09□□□□□ -0.47
TPM1-224ENST00000560615 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms