RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 ODF1Q14990 250 aa14.07□□□□□ -0.16
HMBOX1-215ENST00000560599 HIST2H2BDQ6DRA6 164 aa14.07□□□□□ -0.16
HMBOX1-215ENST00000560599 CSTL1Q9H114 145 aa14.07□□□□□ -0.16
HMBOX1-215ENST00000560599 A0A087WWL8 130 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 TRBV6-5A0A0K0K1A5 114 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 LINC01549A6NIU2 74 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 RBMY1A1P0DJD3 496 aaKnown RBP14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 RBMY1CP0DJD4 496 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 COX8AP10176 69 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 RBMY1FQ15415 496 aaKnown RBP14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 BATFQ16520 125 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 PIK3CD-AS1Q5SR53 167 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 TOMM6Q96B49 74 aa14.06□□□□□ -0.16
HMBOX1-215ENST00000560599 MXRA5Q9NR99 2828 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 OR11H12B2RN74 326 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 F5H697 171 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 ZNF56Q15929 161 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 COL5A1-AS1Q5SY13 56 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 PTH2Q96A98 100 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 JPT2Q9H910 190 aa14.05□□□□□ -0.16
HMBOX1-215ENST00000560599 FLNAP21333 2647 aaKnown RBP14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 DPM2O94777 84 aa14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 LY6G6DO95868 133 aa14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 PROK1P58294 105 aa14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 ZNF124Q15973 351 aa14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 ODF3L2Q3SX64 289 aa14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 ZMAT4Q9H898 229 aa14.04□□□□□ -0.16
HMBOX1-215ENST00000560599 TRAV12-1A0A0B4J245 112 aa14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 ZNF876PQ49A33 203 aa14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 FAM74A4Q5TZK3 123 aa14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 TRPT1Q86TN4 253 aaKnown RBP14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 STHQ8IWL8 128 aa14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 DKK2Q9UBU2 259 aa14.03□□□□□ -0.16
HMBOX1-215ENST00000560599 VCYO14598 125 aa14.02□□□□□ -0.16
HMBOX1-215ENST00000560599 IGKCP01834 107 aa14.02□□□□□ -0.16
HMBOX1-215ENST00000560599 CRYGDP07320 174 aa14.02□□□□□ -0.16
HMBOX1-215ENST00000560599 ANKRD39Q53RE8 183 aa14.02□□□□□ -0.16
HMBOX1-215ENST00000560599 SCGB3A1Q96QR1 104 aa14.02□□□□□ -0.16
HMBOX1-215ENST00000560599 A0A087WX48 190 aa14.01□□□□□ -0.17
HMBOX1-215ENST00000560599 POLR2KP53803 58 aaKnown RBP14.01□□□□□ -0.17
HMBOX1-215ENST00000560599 KIR2DL4Q99706 377 aa14.01□□□□□ -0.17
HMBOX1-215ENST00000560599 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
HMBOX1-215ENST00000560599 MUC4Q99102 2169 aa14□□□□□ -0.17
HMBOX1-215ENST00000560599 H7C1H1 209 aa14□□□□□ -0.17
HMBOX1-215ENST00000560599 M0R2P5 195 aa14□□□□□ -0.17
HMBOX1-215ENST00000560599 C2orf66Q6UXQ4 117 aa14□□□□□ -0.17
HMBOX1-215ENST00000560599 SMR3AQ99954 134 aa14□□□□□ -0.17
HMBOX1-215ENST00000560599 CYSLTR1Q9Y271 337 aa14□□□□□ -0.17
HMBOX1-215ENST00000560599 A8MWV9 139 aa13.99□□□□□ -0.17
HMBOX1-215ENST00000560599 SAP30O75446 220 aa13.99□□□□□ -0.17
HMBOX1-215ENST00000560599 PLNP26678 52 aa13.99□□□□□ -0.17
HMBOX1-215ENST00000560599 NDUFA11Q86Y39 141 aa13.99□□□□□ -0.17
HMBOX1-215ENST00000560599 LINC01587Q99440 93 aa13.99□□□□□ -0.17
HMBOX1-215ENST00000560599 SPXQ9BT56 116 aa13.99□□□□□ -0.17
HMBOX1-215ENST00000560599 SDHAF1A6NFY7 115 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 ADARB2-AS1A8MUL3 147 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 M0QY20 66 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 DLEU1O43261 78 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 FAM110AQ9BQ89 295 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 UNC79Q9P2D8 2635 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 TRBV27A0A0K0K1C4 114 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 HINT1P49773 126 aaPredicted RBP13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 RIPPLY3P57055 190 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 RHOHQ15669 191 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 NSUN5P1Q3KNT7 163 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 STPG4Q8N801 248 aa13.98□□□□□ -0.17
HMBOX1-215ENST00000560599 IGLV1-51P01701 117 aa13.97□□□□□ -0.17
HMBOX1-215ENST00000560599 FGF6P10767 208 aa13.97□□□□□ -0.17
HMBOX1-215ENST00000560599 C12orf54Q6X4T0 127 aa13.97□□□□□ -0.17
HMBOX1-215ENST00000560599 ERASQ7Z444 233 aa13.97□□□□□ -0.17
HMBOX1-215ENST00000560599 NBPF19A0A087WUL8 3843 aa13.96□□□□□ -0.17
HMBOX1-215ENST00000560599 F8VRH5 84 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 RHODO00212 210 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 HTN1P15515 57 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 ZFP2Q6ZN57 461 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 NEGR1Q7Z3B1 354 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 BOD1L2Q8IYS8 172 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 MRPL35Q9NZE8 188 aaKnown RBP13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 CCDC168Q8NDH2 2452 aa13.96□□□□□ -0.18
HMBOX1-215ENST00000560599 ANK3Q12955 4377 aaKnown RBP13.95□□□□□ -0.18
HMBOX1-215ENST00000560599 MORN3Q6PF18 240 aaPredicted RBP13.95□□□□□ -0.18
HMBOX1-215ENST00000560599 C11orf72Q8NBR9 251 aa13.95□□□□□ -0.18
HMBOX1-215ENST00000560599 TMEM141Q96I45 108 aa13.95□□□□□ -0.18
HMBOX1-215ENST00000560599 SIVA1O15304 175 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 NMUP48645 174 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 C2orf91Q6ZV80 131 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 NEXN-AS1Q8NBZ9 246 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 TMEM208Q9BTX3 173 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 TP73-AS1Q9UF72 201 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 TP53TG1Q9Y2A0 90 aa13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 CHTOPQ9Y3Y2 248 aaKnown RBP13.94□□□□□ -0.18
HMBOX1-215ENST00000560599 BAALCQ8WXS3 180 aa13.93□□□□□ -0.18
HMBOX1-215ENST00000560599 TIMM17AQ99595 171 aa13.93□□□□□ -0.18
HMBOX1-215ENST00000560599 HELZ2Q9BYK8 2649 aaKnown RBP13.93□□□□□ -0.18
HMBOX1-215ENST00000560599 AGRNO00468 2067 aa13.93□□□□□ -0.18
HMBOX1-215ENST00000560599 BEAN1Q3B7T3 259 aa13.92□□□□□ -0.18
HMBOX1-215ENST00000560599 TMEM97Q5BJF2 176 aa13.92□□□□□ -0.18
HMBOX1-215ENST00000560599 XCL2Q9UBD3 114 aa13.92□□□□□ -0.18
HMBOX1-215ENST00000560599 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms