RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 LELP1Q5T871 98 aa12.2□□□□□ -0.46
XRCC3-217ENST00000556980 C10orf126Q8N4M7 172 aa12.2□□□□□ -0.46
XRCC3-217ENST00000556980 C14orf178Q8N769 122 aaPredicted RBP12.2□□□□□ -0.46
XRCC3-217ENST00000556980 MED9Q9NWA0 146 aa12.2□□□□□ -0.46
XRCC3-217ENST00000556980 MSRB1Q9NZV6 116 aa12.2□□□□□ -0.46
XRCC3-217ENST00000556980 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
XRCC3-217ENST00000556980 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
XRCC3-217ENST00000556980 TAGLN2P37802 199 aaKnown RBP12.19□□□□□ -0.46
XRCC3-217ENST00000556980 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
XRCC3-217ENST00000556980 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
XRCC3-217ENST00000556980 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
XRCC3-217ENST00000556980 TNFRSF18Q9Y5U5 241 aa12.19□□□□□ -0.46
XRCC3-217ENST00000556980 RAB19A4D1S5 217 aa12.18□□□□□ -0.46
XRCC3-217ENST00000556980 LINC01556Q5JQF7 62 aa12.18□□□□□ -0.46
XRCC3-217ENST00000556980 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
XRCC3-217ENST00000556980 DAZAP1Q96EP5 407 aaKnown RBP12.18□□□□□ -0.46
XRCC3-217ENST00000556980 SMIM12Q96EX1 92 aa12.18□□□□□ -0.46
XRCC3-217ENST00000556980 PKHD1P08F94 4074 aa12.18□□□□□ -0.46
XRCC3-217ENST00000556980 KIAA1109Q2LD37 5005 aa12.17□□□□□ -0.46
XRCC3-217ENST00000556980 LINC00694P0DN24 101 aa12.17□□□□□ -0.46
XRCC3-217ENST00000556980 SPANXN1Q5VSR9 72 aa12.17□□□□□ -0.46
XRCC3-217ENST00000556980 MUC21A0A0G2JKD1 596 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 MUC21A0A140T8X8 626 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 SNAI2O43623 268 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 Q9UF83 564 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 PKD1P98161 4303 aa12.16□□□□□ -0.46
XRCC3-217ENST00000556980 HERC2O95714 4834 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 EREGO14944 169 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 BLOC1S1P78537 153 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 ZNF56Q15929 161 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 SSBP4Q9BWG4 385 aaPredicted RBP12.15□□□□□ -0.46
XRCC3-217ENST00000556980 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
XRCC3-217ENST00000556980 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 A0A087WWC5 75 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 A0A1B0GVG6 124 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 NKX2-5P52952 324 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-217ENST00000556980 RPS20P60866 119 aaKnown RBP12.14□□□□□ -0.47
XRCC3-217ENST00000556980 SSTP61278 116 aa12.14□□□□□ -0.47
XRCC3-217ENST00000556980 TRBV10-1A0A0K0K1A3 114 aa12.13□□□□□ -0.47
XRCC3-217ENST00000556980 C19orf71A6NCJ1 209 aa12.13□□□□□ -0.47
XRCC3-217ENST00000556980 P01737 135 aa12.13□□□□□ -0.47
XRCC3-217ENST00000556980 RPL36AP83881 106 aaKnown RBP12.13□□□□□ -0.47
XRCC3-217ENST00000556980 FER1L6-AS1Q8NA97 138 aa12.13□□□□□ -0.47
XRCC3-217ENST00000556980 RPL36ALQ969Q0 106 aaKnown RBP12.13□□□□□ -0.47
XRCC3-217ENST00000556980 XKRY2A2RUG3 117 aa12.12□□□□□ -0.47
XRCC3-217ENST00000556980 GZMBP10144 247 aa12.12□□□□□ -0.47
XRCC3-217ENST00000556980 KRTAP10-2P60368 255 aa12.12□□□□□ -0.47
XRCC3-217ENST00000556980 RAB4BP61018 213 aa12.12□□□□□ -0.47
XRCC3-217ENST00000556980 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
XRCC3-217ENST00000556980 IBA57-AS1B1ANH7 110 aa12.11□□□□□ -0.47
XRCC3-217ENST00000556980 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
XRCC3-217ENST00000556980 Q9HAA7 133 aa12.11□□□□□ -0.47
XRCC3-217ENST00000556980 RBFOX3A6NFN3 312 aa12.1□□□□□ -0.47
XRCC3-217ENST00000556980 F5H697 171 aa12.1□□□□□ -0.47
XRCC3-217ENST00000556980 PSCAO43653 123 aa12.1□□□□□ -0.47
XRCC3-217ENST00000556980 DNAH11Q96DT5 4516 aa12.09□□□□□ -0.47
XRCC3-217ENST00000556980 TRBV7-3A0A075B6L6 115 aa12.09□□□□□ -0.47
XRCC3-217ENST00000556980 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
XRCC3-217ENST00000556980 A0A087WTM6 91 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 TMEM250H0YL14 139 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 UBE2D3P61077 147 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 UBE2D2P62837 147 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 CACNG7P62955 275 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 Q8N3U1 123 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 LYPD6BQ8NI32 183 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 URGCP-MRPS24S4R325 110 aa12.08□□□□□ -0.48
XRCC3-217ENST00000556980 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
XRCC3-217ENST00000556980 F2Z2F3 143 aa12.07□□□□□ -0.48
XRCC3-217ENST00000556980 LAGE3Q14657 143 aa12.07□□□□□ -0.48
XRCC3-217ENST00000556980 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
XRCC3-217ENST00000556980 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 MGPP08493 103 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 CEBPGP53567 150 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.06□□□□□ -0.48
XRCC3-217ENST00000556980 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 OCC1Q8TAD7 63 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 RPP21Q9H633 154 aaKnown RBP12.06□□□□□ -0.48
XRCC3-217ENST00000556980 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
XRCC3-217ENST00000556980 K7EN84 100 aa12.05□□□□□ -0.48
XRCC3-217ENST00000556980 TOR2AQ5JU69 321 aa12.05□□□□□ -0.48
XRCC3-217ENST00000556980 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
XRCC3-217ENST00000556980 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
XRCC3-217ENST00000556980 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
XRCC3-217ENST00000556980 EIF5A2Q9GZV4 153 aaKnown RBP12.05□□□□□ -0.48
XRCC3-217ENST00000556980 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
XRCC3-217ENST00000556980 KCNIP4Q6PIL6 250 aa12.04□□□□□ -0.48
XRCC3-217ENST00000556980 NIT1Q86X76 327 aa12.04□□□□□ -0.48
XRCC3-217ENST00000556980 RNASE7Q9H1E1 156 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms