RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
PCNX4-213ENST00000556907 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
PCNX4-213ENST00000556907 NOP10Q9NPE3 64 aaKnown RBP11.68□□□□□ -0.54
PCNX4-213ENST00000556907 DNAH7Q8WXX0 4024 aa11.67□□□□□ -0.54
PCNX4-213ENST00000556907 TRAV10A0A0B4J240 114 aa11.67□□□□□ -0.54
PCNX4-213ENST00000556907 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
PCNX4-213ENST00000556907 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
PCNX4-213ENST00000556907 MSRB1Q9NZV6 116 aa11.67□□□□□ -0.54
PCNX4-213ENST00000556907 KLK5Q9Y337 293 aaPredicted RBP11.67□□□□□ -0.54
PCNX4-213ENST00000556907 RAB4BP61018 213 aa11.66□□□□□ -0.54
PCNX4-213ENST00000556907 CEMP1Q6PRD7 247 aaPredicted RBP11.66□□□□□ -0.54
PCNX4-213ENST00000556907 Q6ZTC4 211 aa11.66□□□□□ -0.54
PCNX4-213ENST00000556907 LINC00612Q8N6U2 182 aa11.66□□□□□ -0.54
PCNX4-213ENST00000556907 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
PCNX4-213ENST00000556907 SMIM15Q7Z3B0 74 aa11.65□□□□□ -0.54
PCNX4-213ENST00000556907 MRPL18Q9H0U6 180 aaKnown RBP11.65□□□□□ -0.54
PCNX4-213ENST00000556907 TRAPPC1Q9Y5R8 145 aa11.65□□□□□ -0.54
PCNX4-213ENST00000556907 DEFB130BP0DP73 79 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 DEFB130AP0DP74 79 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 TCTAP57738 103 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 SSTP61278 116 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 SLAQ13239 276 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 ZNF876PQ49A33 203 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 RASL10AQ92737 203 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
PCNX4-213ENST00000556907 MRPL16Q9NX20 251 aaKnown RBP11.64□□□□□ -0.55
PCNX4-213ENST00000556907 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
PCNX4-213ENST00000556907 PHOX2AO14813 284 aa11.63□□□□□ -0.55
PCNX4-213ENST00000556907 ATP5G1P05496 136 aa11.63□□□□□ -0.55
PCNX4-213ENST00000556907 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
PCNX4-213ENST00000556907 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
PCNX4-213ENST00000556907 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
PCNX4-213ENST00000556907 A8MWV9 139 aa11.62□□□□□ -0.55
PCNX4-213ENST00000556907 APCSP02743 223 aa11.62□□□□□ -0.55
PCNX4-213ENST00000556907 TRGC2P03986 189 aa11.62□□□□□ -0.55
PCNX4-213ENST00000556907 EVI2AP22794 236 aa11.62□□□□□ -0.55
PCNX4-213ENST00000556907 FABP9Q0Z7S8 132 aa11.62□□□□□ -0.55
PCNX4-213ENST00000556907 FRZBQ92765 325 aa11.62□□□□□ -0.55
PCNX4-213ENST00000556907 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
PCNX4-213ENST00000556907 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
PCNX4-213ENST00000556907 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
PCNX4-213ENST00000556907 TRGV2A0A075B6R0 118 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 GAGE12BA1L429 117 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 RHODO00212 210 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 RS1O15537 224 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 GAGE7O76087 117 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 GAGE12FP0CL80 117 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 GAGE12GP0CL81 117 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 GAGE12IP0CL82 117 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 Q6ZTI0 123 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
PCNX4-213ENST00000556907 POM121L12Q8N7R1 296 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 JPT2Q9H910 190 aa11.6□□□□□ -0.55
PCNX4-213ENST00000556907 CRYGDP07320 174 aa11.59□□□□□ -0.55
PCNX4-213ENST00000556907 RAB4AP20338 218 aa11.59□□□□□ -0.55
PCNX4-213ENST00000556907 MRPL51Q4U2R6 128 aaKnown RBP11.59□□□□□ -0.55
PCNX4-213ENST00000556907 TRAV4A0A0B4J268 109 aa11.58□□□□□ -0.56
PCNX4-213ENST00000556907 CIDEAO60543 219 aa11.58□□□□□ -0.56
PCNX4-213ENST00000556907 LINC00315P59091 139 aa11.58□□□□□ -0.56
PCNX4-213ENST00000556907 CFAP126Q5VTH2 177 aa11.58□□□□□ -0.56
PCNX4-213ENST00000556907 UFSP1Q6NVU6 142 aa11.58□□□□□ -0.56
PCNX4-213ENST00000556907 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
PCNX4-213ENST00000556907 A0A087WWL8 130 aa11.57□□□□□ -0.56
PCNX4-213ENST00000556907 MGPP08493 103 aa11.57□□□□□ -0.56
PCNX4-213ENST00000556907 ZFP2Q6ZN57 461 aa11.57□□□□□ -0.56
PCNX4-213ENST00000556907 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
PCNX4-213ENST00000556907 CSMD3Q7Z407 3707 aa11.57□□□□□ -0.56
PCNX4-213ENST00000556907 IGLL5B9A064 214 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 PPBPP02775 128 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 HTN3P15516 51 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 RAB5BP61020 215 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 KIAA1644Q3SXP7 199 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 ORMDL3Q8N138 153 aa11.56□□□□□ -0.56
PCNX4-213ENST00000556907 D6R8Y8 96 aa11.55□□□□□ -0.56
PCNX4-213ENST00000556907 F5H768 121 aa11.55□□□□□ -0.56
PCNX4-213ENST00000556907 SRIP30626 198 aa11.55□□□□□ -0.56
PCNX4-213ENST00000556907 ZNF56Q15929 161 aa11.55□□□□□ -0.56
PCNX4-213ENST00000556907 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
PCNX4-213ENST00000556907 LAMTOR2Q9Y2Q5 125 aa11.55□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BKO60814 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BJP06899 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BOP23527 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BBP33778 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BDP58876 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BCP62807 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST2H2BEQ16778 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.54□□□□□ -0.56
PCNX4-213ENST00000556907 SUMO4Q6EEV6 95 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BHQ93079 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BNQ99877 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 HIST1H2BMQ99879 126 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
PCNX4-213ENST00000556907 H3BNG1 76 aa11.53□□□□□ -0.56
PCNX4-213ENST00000556907 NCR2O95944 276 aa11.53□□□□□ -0.56
PCNX4-213ENST00000556907 CKS2P33552 79 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms