RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 WDR73Q6P4I2 378 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 SFRP2Q96HF1 295 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 DYNC1H1Q14204 4646 aaKnown RBP7.39□□□□□ -1.23
TMEM260-206ENST00000555046 SMIM17P0DL12 118 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 GATA1P15976 413 aaPredicted RBP7.39□□□□□ -1.23
TMEM260-206ENST00000555046 RHOHQ15669 191 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 CLLU1Q5K131 121 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 ZNF575Q86XF7 245 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 C15orf54Q8N8G6 183 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 VSIG2Q96IQ7 327 aa7.39□□□□□ -1.23
TMEM260-206ENST00000555046 RPP21Q9H633 154 aaKnown RBP7.39□□□□□ -1.23
TMEM260-206ENST00000555046 A0A096LPF7 62 aa7.38□□□□□ -1.23
TMEM260-206ENST00000555046 GATCO43716 136 aaKnown RBP7.38□□□□□ -1.23
TMEM260-206ENST00000555046 SRIP30626 198 aa7.38□□□□□ -1.23
TMEM260-206ENST00000555046 RPL19P84098 196 aaKnown RBP7.38□□□□□ -1.23
TMEM260-206ENST00000555046 LINC01551Q86U37 167 aa7.38□□□□□ -1.23
TMEM260-206ENST00000555046 TPPP3Q9BW30 176 aa7.38□□□□□ -1.23
TMEM260-206ENST00000555046 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
TMEM260-206ENST00000555046 HSPG2P98160 4391 aa7.38□□□□□ -1.23
TMEM260-206ENST00000555046 FAM231BA6NCW3 169 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 K7EN84 100 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 GYPEP15421 78 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 CT83Q5H943 113 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 BORCS7Q96B45 105 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 RNASE7Q9H1E1 156 aaKnown RBP7.37□□□□□ -1.23
TMEM260-206ENST00000555046 OSTCQ9NRP0 149 aa7.37□□□□□ -1.23
TMEM260-206ENST00000555046 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 K7EQD1 137 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 NXPH4O95158 308 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 TRGC1P0CF51 173 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 RAB4BP61018 213 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 UQCC3Q6UW78 93 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.36□□□□□ -1.23
TMEM260-206ENST00000555046 AP1S3Q96PC3 154 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 GFRA4Q9GZZ7 299 aa7.36□□□□□ -1.23
TMEM260-206ENST00000555046 A0A087WWL8 130 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 TRBV10-1A0A0K0K1A3 114 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 CRYGDP07320 174 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 FOXA3P55318 350 aaPredicted RBP7.35□□□□□ -1.23
TMEM260-206ENST00000555046 ESRGQ1W209 222 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 UFSP1Q6NVU6 142 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 OR10AG1Q8NH19 301 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
TMEM260-206ENST00000555046 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 C9JQL5 133 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 F5H697 171 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 H7C1H1 209 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 GZMBP10144 247 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 NTF3P20783 257 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 TIRAPP58753 221 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 SSTP61278 116 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 SRSF3P84103 164 aaKnown RBP7.34□□□□□ -1.23
TMEM260-206ENST00000555046 IFITM2Q01629 132 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 OR10G8Q8NGN5 311 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 UPK3BQ9BT76 320 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 SAMD10Q9BYL1 202 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 Q9H8V8 135 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 JPT2Q9H910 190 aa7.34□□□□□ -1.23
TMEM260-206ENST00000555046 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
TMEM260-206ENST00000555046 TRAV9-2A0A087WT02 112 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 K7EP13 123 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 PPP1R2P9O14990 202 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 CTRLP40313 264 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 RPL23P62829 140 aaKnown RBP7.33□□□□□ -1.24
TMEM260-206ENST00000555046 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
TMEM260-206ENST00000555046 PNRC1Q12796 327 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-206ENST00000555046 TWIST1Q15672 202 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 ADIRFQ15847 76 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 C14orf178Q8N769 122 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-206ENST00000555046 ATP6V0E2Q8NHE4 81 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
TMEM260-206ENST00000555046 ISOC2Q96AB3 205 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 CNFNQ9BYD5 112 aa7.33□□□□□ -1.24
TMEM260-206ENST00000555046 A0A087WWC5 75 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 TRAV8-6A0A0B4J262 113 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 MUC21A0A0G2JKD1 596 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 MUC21A0A140T8X8 626 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 BTF3P20290 206 aaKnown RBP7.32□□□□□ -1.24
TMEM260-206ENST00000555046 ZNF56Q15929 161 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 TTC32Q5I0X7 151 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 GTSF1LQ9H1H1 148 aa7.32□□□□□ -1.24
TMEM260-206ENST00000555046 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 A0A1B0GUT8 65 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 HIGD1CA8MV81 97 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 MT-ND4LP03901 98 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 ZNRF2Q8NHG8 242 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 FRZBQ92765 325 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 PGLYRP4Q96LB8 373 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
TMEM260-206ENST00000555046 NAT8BQ9UHF3 227 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms