RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SYNJ2BPP57105 145 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 FBXL19-AS1Q494R0 122 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 HHLA3Q9XRX5 114 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 A0A087WX48 190 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 ADARB2-AS1A8MUL3 147 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 PRSS2P07478 247 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 GATD1Q8NB37 220 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 F8VRH5 84 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 PRB1P04280 392 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 LINC01549A6NIU2 74 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 C12orf74Q32Q52 190 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 CKS1BP61024 79 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 NRACQ8N912 160 aa9□□□□□ -0.97
XRCC3-208ENST00000554811 DEFB136Q30KP8 78 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 RASL10AQ92737 203 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 TSSC4Q9Y5U2 329 aaPredicted RBP8.99□□□□□ -0.97
XRCC3-208ENST00000554811 PLNP26678 52 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 OVOL1O14753 267 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 IGHV4-59P01825 116 aa8.99□□□□□ -0.97
XRCC3-208ENST00000554811 A0A0U1RRA0 63 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 HOXA3O43365 443 aaPredicted RBP8.98□□□□□ -0.97
XRCC3-208ENST00000554811 ID1P41134 155 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 EBI3Q14213 229 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 VPS13CQ709C8 3753 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 PLEKHB2Q96CS7 222 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 DAZ1Q9NQZ3 744 aaKnown RBP8.98□□□□□ -0.97
XRCC3-208ENST00000554811 TRAV2A0A0B4J234 112 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 SDHAF1A6NFY7 115 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 IGLL5B9A064 214 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 HERVK_113P61574 105 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 C9orf47Q6ZRZ4 202 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
XRCC3-208ENST00000554811 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
XRCC3-208ENST00000554811 J3QR89 54 aa8.97□□□□□ -0.97
XRCC3-208ENST00000554811 GAGE13Q4V321 117 aa8.97□□□□□ -0.97
XRCC3-208ENST00000554811 ITLN2Q8WWU7 325 aaPredicted RBP8.97□□□□□ -0.97
XRCC3-208ENST00000554811 CSMD2Q7Z408 3487 aa8.97□□□□□ -0.97
XRCC3-208ENST00000554811 MDFICQ9P1T7 246 aa8.97□□□□□ -0.97
XRCC3-208ENST00000554811 FAM223BA6NKX1 122 aa8.96□□□□□ -0.97
XRCC3-208ENST00000554811 FAM223AQ8IWN6 122 aa8.96□□□□□ -0.97
XRCC3-208ENST00000554811 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.97
XRCC3-208ENST00000554811 RBAKDNA6NC62 111 aa8.96□□□□□ -0.97
XRCC3-208ENST00000554811 LGALS3P17931 250 aaKnown RBP8.96□□□□□ -0.97
XRCC3-208ENST00000554811 BAALCQ8WXS3 180 aa8.96□□□□□ -0.97
XRCC3-208ENST00000554811 PTH2Q96A98 100 aa8.96□□□□□ -0.97
XRCC3-208ENST00000554811 A0A1W2PRX2 142 aa8.96□□□□□ -0.98
XRCC3-208ENST00000554811 MRAP2Q96G30 205 aa8.96□□□□□ -0.98
XRCC3-208ENST00000554811 CHD6Q8TD26 2715 aa8.96□□□□□ -0.98
XRCC3-208ENST00000554811 MUC4Q99102 2169 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 SIVA1O15304 175 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 ZNF575Q86XF7 245 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 TEX15Q9BXT5 2789 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 C11orf86A6NJI1 115 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 NDUFA4O00483 81 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 FBN2P35556 2912 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 INSL3P51460 131 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 SNRPD3P62318 126 aaKnown RBP8.95□□□□□ -0.98
XRCC3-208ENST00000554811 SUMO4Q6EEV6 95 aa8.95□□□□□ -0.98
XRCC3-208ENST00000554811 NF1P21359 2839 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 IGHV3-38A0A0C4DH36 116 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 AVPP01185 164 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 MSMBP08118 114 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 P0DMU3 169 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 FAM231AP0DMU4 169 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 FAM231CP0DMU5 169 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 AZU1P20160 251 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 PHLDA1Q8WV24 401 aaPredicted RBP8.94□□□□□ -0.98
XRCC3-208ENST00000554811 UFSP1Q6NVU6 142 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 CEMP1Q6PRD7 247 aaPredicted RBP8.94□□□□□ -0.98
XRCC3-208ENST00000554811 SPXQ9BT56 116 aa8.94□□□□□ -0.98
XRCC3-208ENST00000554811 LGALS1P09382 135 aaKnown RBP8.93□□□□□ -0.98
XRCC3-208ENST00000554811 DEFB112Q30KQ8 113 aa8.93□□□□□ -0.98
XRCC3-208ENST00000554811 GPHB5Q86YW7 130 aa8.93□□□□□ -0.98
XRCC3-208ENST00000554811 IGLV2-18A0A075B6J9 118 aa8.93□□□□□ -0.98
XRCC3-208ENST00000554811 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
XRCC3-208ENST00000554811 ZFP2Q6ZN57 461 aa8.93□□□□□ -0.98
XRCC3-208ENST00000554811 TMEM190Q8WZ59 177 aa8.93□□□□□ -0.98
XRCC3-208ENST00000554811 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
XRCC3-208ENST00000554811 G3V4G9 280 aa8.92□□□□□ -0.98
XRCC3-208ENST00000554811 Q8N1Y9 231 aa8.92□□□□□ -0.98
XRCC3-208ENST00000554811 PIFOQ8TCI5 191 aa8.92□□□□□ -0.98
XRCC3-208ENST00000554811 IGKV3OR2-268A0A0C4DH90 116 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 RRN3P1Q2M238 152 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 FOXI2Q6ZQN5 318 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 SYT8Q8NBV8 401 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 USMG5Q96IX5 58 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 ATP6V0BQ99437 205 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 PROK1P58294 105 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 DEFB131AP59861 70 aa8.91□□□□□ -0.98
XRCC3-208ENST00000554811 RNF223E7ERA6 249 aa8.9□□□□□ -0.98
XRCC3-208ENST00000554811 VCYO14598 125 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms