RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 CHCHD1Q96BP2 118 aaKnown RBP7.85□□□□□ -1.15
PABPN1-203ENST00000553960 TPPP3Q9BW30 176 aa7.85□□□□□ -1.15
PABPN1-203ENST00000553960 NACAE9PAV3 2078 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 IGHV4-30-4P0DP06 118 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 SRIP30626 198 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 RRN3P1Q2M238 152 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 AMN1Q8IY45 258 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 RNF183Q96D59 192 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 RCHY1Q96PM5 261 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 X6R8D5 127 aa7.84□□□□□ -1.15
PABPN1-203ENST00000553960 LOC105371267A0A1B0GV96 52 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 RS1O15537 224 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 MIFP14174 115 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 FXYD7P58549 80 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 LINC00310P59036 64 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 NRACQ8N912 160 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 PRELID3AQ96N28 172 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 TMEM208Q9BTX3 173 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 NXT2Q9NPJ8 142 aaKnown RBP7.83□□□□□ -1.16
PABPN1-203ENST00000553960 TIMM8BQ9Y5J9 83 aaPredicted RBP7.83□□□□□ -1.16
PABPN1-203ENST00000553960 NOTCH1P46531 2555 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 DNAH3Q8TD57 4116 aa7.83□□□□□ -1.16
PABPN1-203ENST00000553960 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
PABPN1-203ENST00000553960 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
PABPN1-203ENST00000553960 LYRM9A8MSI8 78 aa7.82□□□□□ -1.16
PABPN1-203ENST00000553960 RPL35AP18077 110 aaKnown RBP7.82□□□□□ -1.16
PABPN1-203ENST00000553960 CKS2P33552 79 aa7.82□□□□□ -1.16
PABPN1-203ENST00000553960 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
PABPN1-203ENST00000553960 IGLV2-18A0A075B6J9 118 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 D6R8Y8 96 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 H7C1H1 209 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 M0QY20 66 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 TCAPO15273 167 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 SMIM17P0DL12 118 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 AZU1P20160 251 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 SNRPEP62304 92 aaKnown RBP7.81□□□□□ -1.16
PABPN1-203ENST00000553960 CFAP126Q5VTH2 177 aa7.81□□□□□ -1.16
PABPN1-203ENST00000553960 TRBV10-1A0A0K0K1A3 114 aa7.8□□□□□ -1.16
PABPN1-203ENST00000553960 TNFRSF6BO95407 300 aa7.8□□□□□ -1.16
PABPN1-203ENST00000553960 LINC00614P0C842 121 aa7.8□□□□□ -1.16
PABPN1-203ENST00000553960 POLR2KP53803 58 aaKnown RBP7.8□□□□□ -1.16
PABPN1-203ENST00000553960 NDUFA6P56556 154 aa7.8□□□□□ -1.16
PABPN1-203ENST00000553960 KIAA1644Q3SXP7 199 aa7.8□□□□□ -1.16
PABPN1-203ENST00000553960 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
PABPN1-203ENST00000553960 DNAJC30Q96LL9 226 aa7.8□□□□□ -1.16
PABPN1-203ENST00000553960 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 TRBV27A0A0K0K1C4 114 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 IFITM10A6NMD0 228 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 G3V4G9 280 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 SERF1AO75920 110 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 NIT1Q86X76 327 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 Q8N8P6 123 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 Q8NAQ8 132 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 TMEM18Q96B42 140 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
PABPN1-203ENST00000553960 MUC21A0A0G2JKD1 596 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 MUC21A0A140T8X8 626 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 NPYP01303 97 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 G0S2P27469 103 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 SUMO2P61956 95 aaKnown RBP7.78□□□□□ -1.16
PABPN1-203ENST00000553960 HIST1H2BLQ99880 126 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 C11orf68Q9H3H3 251 aaKnown RBP7.78□□□□□ -1.16
PABPN1-203ENST00000553960 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 NIT2Q9NQR4 276 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
PABPN1-203ENST00000553960 TRBV6-4A0A1B0GX49 114 aa7.77□□□□□ -1.17
PABPN1-203ENST00000553960 SUMO4Q6EEV6 95 aa7.77□□□□□ -1.17
PABPN1-203ENST00000553960 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
PABPN1-203ENST00000553960 SAMD10Q9BYL1 202 aa7.76□□□□□ -1.17
PABPN1-203ENST00000553960 JPT2Q9H910 190 aa7.76□□□□□ -1.17
PABPN1-203ENST00000553960 VCYO14598 125 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 NUPR1O60356 82 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 HSBP1O75506 76 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 NPSP0C0P6 89 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 GATA1P15976 413 aaPredicted RBP7.75□□□□□ -1.17
PABPN1-203ENST00000553960 S100A2P29034 98 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 Q6ZTI0 123 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 OR11H2Q8NH07 326 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 PRSS3P2Q8NHM4 247 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 TMEM70Q9BUB7 260 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 NOP10Q9NPE3 64 aaKnown RBP7.75□□□□□ -1.17
PABPN1-203ENST00000553960 DKK2Q9UBU2 259 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 NBEAL2Q6ZNJ1 2754 aa7.75□□□□□ -1.17
PABPN1-203ENST00000553960 TRGV1A0A0A0MS02 117 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 HTN1P15515 57 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 DEFB135Q30KP9 77 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 ORMDL2Q53FV1 153 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 FA2HQ7L5A8 372 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
PABPN1-203ENST00000553960 IGHV3OR16-12A0A075B7B8 117 aa7.73□□□□□ -1.17
PABPN1-203ENST00000553960 A0A087WWL8 130 aa7.73□□□□□ -1.17
PABPN1-203ENST00000553960 K7EIL1 84 aa7.73□□□□□ -1.17
PABPN1-203ENST00000553960 GAS8-AS1O95177 125 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms