RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 JPT2Q9H910 190 aa8.43□□□□□ -1.06
NEK9-202ENST00000553823 RETNQ9HD89 108 aa8.43□□□□□ -1.06
NEK9-202ENST00000553823 A8MWV9 139 aa8.42□□□□□ -1.06
NEK9-202ENST00000553823 PHOX2AO14813 284 aa8.42□□□□□ -1.06
NEK9-202ENST00000553823 Q6ZTI0 123 aa8.42□□□□□ -1.06
NEK9-202ENST00000553823 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
NEK9-202ENST00000553823 A0A087WWL8 130 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 CRYGDP07320 174 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 RAB4AP20338 218 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 KIAA1644Q3SXP7 199 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
NEK9-202ENST00000553823 SPATA25Q9BR10 227 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 KIF25-AS1Q9Y6Z4 181 aa8.41□□□□□ -1.06
NEK9-202ENST00000553823 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 LYRM9A8MSI8 78 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 DEFB4AO15263 64 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 RS1O15537 224 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 GAGE7O76087 117 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 MGPP08493 103 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 LINC00315P59091 139 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 RAB5BP61020 215 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.06
NEK9-202ENST00000553823 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 FAM222AQ5U5X8 452 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 OR4C5Q8NGB2 326 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
NEK9-202ENST00000553823 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 D6R8Y8 96 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 F5H697 171 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 RHODO00212 210 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 PPBPP02775 128 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 SRIP30626 198 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 CKS2P33552 79 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 UFSP1Q6NVU6 142 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 ORMDL3Q8N138 153 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 ALKBH7Q9BT30 221 aaPredicted RBP8.38□□□□□ -1.07
NEK9-202ENST00000553823 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 U3KQK5 164 aa8.38□□□□□ -1.07
NEK9-202ENST00000553823 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 SMKR1H3BMG3 65 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 CIDEAO60543 219 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BKO60814 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BJP06899 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 DEFB130BP0DP73 79 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 DEFB130AP0DP74 79 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BOP23527 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BBP33778 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BDP58876 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BCP62807 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 ZNF56Q15929 161 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST2H2BEQ16778 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.37□□□□□ -1.07
NEK9-202ENST00000553823 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BHQ93079 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 PRELID3AQ96N28 172 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 C18orf15Q96N68 181 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BNQ99877 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 HIST1H2BMQ99879 126 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 C11orf68Q9H3H3 251 aaKnown RBP8.37□□□□□ -1.07
NEK9-202ENST00000553823 ZMAT4Q9H898 229 aa8.37□□□□□ -1.07
NEK9-202ENST00000553823 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
NEK9-202ENST00000553823 TRAV26-2A0A0B4J265 109 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 NCR2O95944 276 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 IGHV3-53P01767 116 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 DEFA6Q01524 100 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 SUMO4Q6EEV6 95 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 ZNF479Q96JC4 524 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
NEK9-202ENST00000553823 GAS8-AS1O95177 125 aa8.35□□□□□ -1.07
NEK9-202ENST00000553823 DAD1P61803 113 aa8.35□□□□□ -1.07
NEK9-202ENST00000553823 LAMTOR2Q9Y2Q5 125 aa8.35□□□□□ -1.07
NEK9-202ENST00000553823 A0A0J9YWU9 116 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 H7C1H1 209 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 M0QY20 66 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 TNFRSF6BO95407 300 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 PPP1R17O96001 155 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 NPYP01303 97 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
NEK9-202ENST00000553823 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 Q6ZSN1 163 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 NRACQ8N912 160 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 C18orf32Q8TCD1 76 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 EDA2RQ9HAV5 297 aa8.34□□□□□ -1.07
NEK9-202ENST00000553823 HUWE1Q7Z6Z7 4374 aaKnown RBP8.33□□□□□ -1.08
NEK9-202ENST00000553823 Q0VG73 95 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms