RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TRAV8-6A0A0B4J262 113 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 TRAV4A0A0B4J268 109 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 A0A1B0GV90 55 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 LINC00614P0C842 121 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 IMMP2LQ96T52 175 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 WDR61Q9GZS3 305 aaKnown RBP6.73□□□□□ -1.33
ACTN1-210ENST00000553779 Q9HAA7 133 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
ACTN1-210ENST00000553779 IGHV3-16A0A0C4DH30 117 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 M0R143 59 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 M0R2P5 195 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 IFNA1P01562 189 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
ACTN1-210ENST00000553779 TRGC1P0CF51 173 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 IQCJQ1A5X6 159 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
ACTN1-210ENST00000553779 OR10J3Q5JRS4 329 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 OR2G3Q8NGZ4 309 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 FAM213BQ8TBF2 198 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 TMEM18Q96B42 140 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 HERC1Q15751 4861 aa6.72□□□□□ -1.33
ACTN1-210ENST00000553779 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.33
ACTN1-210ENST00000553779 TRAV21A0A0B4J279 112 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 IGHV3-38A0A0C4DH36 116 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 A0A1W2PPV4 95 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
ACTN1-210ENST00000553779 DIRC3C9JPN6 131 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 F6UZH7 168 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 TRGC2P03986 189 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 AKR1C3P42330 323 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 HAMPP81172 84 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 SERF2P84101 59 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 Q6AWC8 147 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 Q6ZSN1 163 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 GOLT1AQ6ZVE7 132 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 MBD3L1Q8WWY6 194 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 RASL10AQ92737 203 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 PRADC1Q9BSG0 188 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 SMIM3Q9BZL3 60 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 OTORQ9NRC9 128 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.34
ACTN1-210ENST00000553779 LOC100131303A0A0U1RQF7 123 aa6.7□□□□□ -1.34
ACTN1-210ENST00000553779 PFN1P07737 140 aaKnown RBP6.7□□□□□ -1.34
ACTN1-210ENST00000553779 FABP4P15090 132 aa6.7□□□□□ -1.34
ACTN1-210ENST00000553779 XGP55808 180 aa6.7□□□□□ -1.34
ACTN1-210ENST00000553779 NTN5Q8WTR8 489 aaPredicted RBP6.7□□□□□ -1.34
ACTN1-210ENST00000553779 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
ACTN1-210ENST00000553779 KCNS1Q96KK3 526 aa6.7□□□□□ -1.34
ACTN1-210ENST00000553779 PGPA6NDG6 321 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 J3QL48 77 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 K7EQM0 130 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 PHOX2AO14813 284 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 IGHV3-33P01772 117 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 CXCL1P09341 107 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 IGHV3-30-3P0DP02 117 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 GZMBP10144 247 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 ATP6V0CP27449 155 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 TMEM241Q24JQ0 296 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-210ENST00000553779 WFDC1Q9HC57 220 aa6.69□□□□□ -1.34
ACTN1-210ENST00000553779 IGHV3-73A0A0B4J1V6 119 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 TMEM250H0YL14 139 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 GNRH2O43555 120 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 TYMSP04818 313 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 RHOHQ15669 191 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 ANKRD39Q53RE8 183 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 LINC01556Q5JQF7 62 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 PQLC2Q6ZP29 291 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 ZNF664Q8N3J9 261 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 TMEM70Q9BUB7 260 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
ACTN1-210ENST00000553779 TRAV8-1A0A0A6YYK1 113 aa6.67□□□□□ -1.34
ACTN1-210ENST00000553779 TGIF2-C20orf24A0A0A6YYL0 155 aa6.67□□□□□ -1.34
ACTN1-210ENST00000553779 GATA1P15976 413 aaPredicted RBP6.67□□□□□ -1.34
ACTN1-210ENST00000553779 GNG5P63218 68 aa6.67□□□□□ -1.34
ACTN1-210ENST00000553779 TDRG1Q3Y452 100 aa6.67□□□□□ -1.34
ACTN1-210ENST00000553779 TM2D2Q9BX73 214 aa6.67□□□□□ -1.34
ACTN1-210ENST00000553779 SH3BGRL3Q9H299 93 aa6.67□□□□□ -1.34
ACTN1-210ENST00000553779 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 ZNF727A8MUV8 499 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 HMGB3O15347 200 aaKnown RBP6.66□□□□□ -1.34
ACTN1-210ENST00000553779 MBP02144 154 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 BCL2P10415 239 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 TIRAPP58753 221 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 KCNIP4Q6PIL6 250 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 Q8N814 137 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 CYB561D1Q8N8Q1 229 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 SGK494Q96LW2 274 aa6.66□□□□□ -1.34
ACTN1-210ENST00000553779 TRAV9-1A0A075B6T8 112 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 SERTM2A0A1B0GWG4 89 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 DLEU1O43261 78 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms