RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ISOC2Q96AB3 205 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 C12orf57Q99622 126 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 MRPL16Q9NX20 251 aaKnown RBP8.12□□□□□ -1.11
CKAP4-202ENST00000552828 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
CKAP4-202ENST00000552828 M0R2P5 195 aa8.11□□□□□ -1.11
CKAP4-202ENST00000552828 SH2D1AO60880 128 aa8.11□□□□□ -1.11
CKAP4-202ENST00000552828 ZNF674Q2M3X9 581 aa8.11□□□□□ -1.11
CKAP4-202ENST00000552828 NHLRC2Q8NBF2 726 aa8.11□□□□□ -1.11
CKAP4-202ENST00000552828 RASL10AQ92737 203 aa8.11□□□□□ -1.11
CKAP4-202ENST00000552828 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 SIVA1O15304 175 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 S100A4P26447 101 aaKnown RBP8.1□□□□□ -1.11
CKAP4-202ENST00000552828 ELOBQ15370 118 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 DERL1Q9BUN8 251 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
CKAP4-202ENST00000552828 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
CKAP4-202ENST00000552828 ASIPP42127 132 aa8.09□□□□□ -1.11
CKAP4-202ENST00000552828 GNG4P50150 75 aa8.09□□□□□ -1.11
CKAP4-202ENST00000552828 XGP55808 180 aa8.09□□□□□ -1.11
CKAP4-202ENST00000552828 CENPWQ5EE01 88 aa8.09□□□□□ -1.11
CKAP4-202ENST00000552828 NAT8Q9UHE5 227 aa8.09□□□□□ -1.11
CKAP4-202ENST00000552828 TRBV24-1A0A075B6N3 115 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 IGHV3-53P01767 116 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 SMIM12Q96EX1 92 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
CKAP4-202ENST00000552828 C9JCJ5 164 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 EREGO14944 169 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 NXPH4O95158 308 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 MGST1P10620 155 aaKnown RBP8.07□□□□□ -1.12
CKAP4-202ENST00000552828 RNASE3P12724 160 aaKnown RBP8.07□□□□□ -1.12
CKAP4-202ENST00000552828 RPS10P46783 165 aaKnown RBP8.07□□□□□ -1.12
CKAP4-202ENST00000552828 SLAQ13239 276 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 DNLZQ5SXM8 178 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 PRR27Q6MZM9 219 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 PTH2Q96A98 100 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 IL36BQ9NZH7 164 aa8.07□□□□□ -1.12
CKAP4-202ENST00000552828 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 TRAV4A0A0B4J268 109 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 GRIFINA4D1Z8 144 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 ZNF727A8MUV8 499 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 PAX4O43316 350 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 CXCL1P09341 107 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 CEBPGP53567 150 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 ERVFC1-1P60608 527 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 CTAG1AP78358 180 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 TMEM241Q24JQ0 296 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 DAZAP1Q96EP5 407 aaKnown RBP8.06□□□□□ -1.12
CKAP4-202ENST00000552828 ICOSQ9Y6W8 199 aa8.06□□□□□ -1.12
CKAP4-202ENST00000552828 TRGV4A0A0C4DH28 118 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 H3BVH4 76 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 IGLV2-8P01709 118 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 ARMS2P0C7Q2 107 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 FHL2Q14192 279 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 LYPD5Q6UWN5 251 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 ZNF479Q96JC4 524 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 SMIM7Q9BQ49 75 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 HHLA3Q9XRX5 114 aa8.05□□□□□ -1.12
CKAP4-202ENST00000552828 TRBV20OR9-2A0A075B6H5 130 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 A0A087WTM6 91 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 PGPEP1LA6NFU8 196 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 K7EP13 123 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 CIDEAO60543 219 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 FUSP35637 526 aaKnown RBP eCLIP8.04□□□□□ -1.12
CKAP4-202ENST00000552828 CRYBA4P53673 196 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 RPL19P84098 196 aaKnown RBP8.04□□□□□ -1.12
CKAP4-202ENST00000552828 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 SYT8Q8NBV8 401 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 ANAPC16Q96DE5 110 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 PARLQ9H300 379 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 PHLDA3Q9Y5J5 127 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 TNFRSF18Q9Y5U5 241 aa8.04□□□□□ -1.12
CKAP4-202ENST00000552828 TRAV9-2A0A087WT02 112 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 TGIF2-C20orf24A0A0A6YYL0 155 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 PCP4L1A6NKN8 68 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 RS1O15537 224 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 S100PP25815 95 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 MRPL23Q16540 153 aaKnown RBP8.03□□□□□ -1.12
CKAP4-202ENST00000552828 Q5VSD8 79 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 CFAP126Q5VTH2 177 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
CKAP4-202ENST00000552828 C19orf71A6NCJ1 209 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 A8MWV9 139 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 PHOX2AO14813 284 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BKO60814 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 P01737 135 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BJP06899 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BOP23527 126 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms