RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
CHMP1A-210ENST00000551981 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
CHMP1A-210ENST00000551981 NDUFA13Q9P0J0 144 aa9.17□□□□□ -0.94
CHMP1A-210ENST00000551981 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
CHMP1A-210ENST00000551981 A0A087WWL8 130 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 CXorf1O96002 111 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 MBP02144 154 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 ARMS2P0C7Q2 107 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 DGAT2L7PQ6IED9 249 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 SFRP2Q96HF1 295 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 PHLDA3Q9Y5J5 127 aa9.16□□□□□ -0.94
CHMP1A-210ENST00000551981 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 TRAV34A0A0B4J273 112 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 HLA-DQA1P01909 254 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 UBE2D3P61077 147 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 PKIAP61925 76 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 UBE2D2P62837 147 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 DNLZQ5SXM8 178 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 ENHOQ6UWT2 76 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 LINC00299Q6ZSB3 139 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 C15orf54Q8N8G6 183 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 HSD17B11Q8NBQ5 300 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 S100ZQ8WXG8 99 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 PSMG3Q9BT73 122 aaPredicted RBP9.15□□□□□ -0.94
CHMP1A-210ENST00000551981 TRBV6-8A0A0A6YYG3 113 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 A0A0D9SG52 128 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 KRBOX1C9JBD0 128 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 M0R036 132 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 M0R381 172 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 IFNA7P01567 189 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 TPT1P13693 172 aaKnown RBP9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 MIAQ16674 131 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 Q6ZRU5 148 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 LRP2P98164 4655 aa9.14□□□□□ -0.95
CHMP1A-210ENST00000551981 GRIFINA4D1Z8 144 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 UPK1BO75841 260 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 PRSS1P07477 247 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 SERF2P84101 59 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 Q86TA4 180 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 ZFP82Q8N141 532 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
CHMP1A-210ENST00000551981 PEX7O00628 323 aa9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 RPL19P84098 196 aaKnown RBP9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 OR10G8Q8NGN5 311 aa9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 MARVELD1Q9BSK0 173 aa9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
CHMP1A-210ENST00000551981 SH2D1AO60880 128 aa9.11□□□□□ -0.95
CHMP1A-210ENST00000551981 ATP6V0CP27449 155 aa9.11□□□□□ -0.95
CHMP1A-210ENST00000551981 HIST1H2BAQ96A08 127 aa9.11□□□□□ -0.95
CHMP1A-210ENST00000551981 CHCHD5Q9BSY4 110 aa9.11□□□□□ -0.95
CHMP1A-210ENST00000551981 TNFSF18Q9UNG2 199 aa9.11□□□□□ -0.95
CHMP1A-210ENST00000551981 ZFP30Q9Y2G7 519 aa9.11□□□□□ -0.95
CHMP1A-210ENST00000551981 PTTG1O95997 202 aa9.1□□□□□ -0.95
CHMP1A-210ENST00000551981 CRIP1P50238 77 aa9.1□□□□□ -0.95
CHMP1A-210ENST00000551981 RAB4BP61018 213 aa9.1□□□□□ -0.95
CHMP1A-210ENST00000551981 NKX6-2Q9C056 277 aaPredicted RBP9.1□□□□□ -0.95
CHMP1A-210ENST00000551981 TNXBP22105 4242 aa9.1□□□□□ -0.95
CHMP1A-210ENST00000551981 TMSB15BA0A087X1C1 80 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 UBE2G2P60604 165 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 ZNF56Q15929 161 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 TMEM97Q5BJF2 176 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 COX8CQ7Z4L0 72 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 CLRN3Q8NCR9 226 aa9.09□□□□□ -0.95
CHMP1A-210ENST00000551981 PANO1I0J062 215 aa9.08□□□□□ -0.96
CHMP1A-210ENST00000551981 UBE2G1P62253 170 aa9.08□□□□□ -0.96
CHMP1A-210ENST00000551981 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
CHMP1A-210ENST00000551981 FMC1Q96HJ9 113 aa9.08□□□□□ -0.96
CHMP1A-210ENST00000551981 DPH3P1Q9H4G8 78 aa9.08□□□□□ -0.96
CHMP1A-210ENST00000551981 ZNF674Q2M3X9 581 aa9.07□□□□□ -0.96
CHMP1A-210ENST00000551981 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
CHMP1A-210ENST00000551981 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
CHMP1A-210ENST00000551981 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
CHMP1A-210ENST00000551981 CTXND1A0A1B0GTU2 59 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 FAM74A7A6NL05 159 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 DEFA1P59665 94 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 DEFA3P59666 94 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 CNBPP62633 177 aaKnown RBP9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 IFITM3Q01628 133 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 PRR27Q6MZM9 219 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 CLPSL2Q6UWE3 100 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
CHMP1A-210ENST00000551981 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
CHMP1A-210ENST00000551981 A6NHS1 94 aa9.05□□□□□ -0.96
CHMP1A-210ENST00000551981 RBX1P62877 108 aa9.05□□□□□ -0.96
CHMP1A-210ENST00000551981 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
CHMP1A-210ENST00000551981 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
CHMP1A-210ENST00000551981 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
CHMP1A-210ENST00000551981 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms