RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 MBD3L1Q8WWY6 194 aa6.5□□□□□ -1.37
GCN1-208ENST00000551549 TCEAL7Q9BRU2 100 aa6.5□□□□□ -1.37
GCN1-208ENST00000551549 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
GCN1-208ENST00000551549 EPM2AB3EWF7 344 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 M0R381 172 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 SEC11BP0C7V7 166 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 AKR1C3P42330 323 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 ZNF345Q14585 488 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 FAM74A4Q5TZK3 123 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 SFRP2Q96HF1 295 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 ZNF471Q9BX82 626 aaPredicted RBP6.49□□□□□ -1.37
GCN1-208ENST00000551549 PHLDA3Q9Y5J5 127 aa6.49□□□□□ -1.37
GCN1-208ENST00000551549 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
GCN1-208ENST00000551549 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
GCN1-208ENST00000551549 IGLV5-52A0A0A0MRZ9 124 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 SCO2A0A1W2PP80 73 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 HMSDA8MTL9 139 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 UMAD1C9J7I0 102 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 RHODO00212 210 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 BCL2L11O43521 198 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 TPT1P13693 172 aaKnown RBP6.48□□□□□ -1.37
GCN1-208ENST00000551549 HAMPP81172 84 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 DAZ4Q86SG3 579 aaKnown RBP6.48□□□□□ -1.37
GCN1-208ENST00000551549 Q8N814 137 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 DAZ3Q9NR90 486 aaKnown RBP6.48□□□□□ -1.37
GCN1-208ENST00000551549 BOLA1Q9Y3E2 137 aa6.48□□□□□ -1.37
GCN1-208ENST00000551549 FLG2Q5D862 2391 aaPredicted RBP6.48□□□□□ -1.37
GCN1-208ENST00000551549 A0A0D9SG52 128 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 KANTRA0A1W2PQU2 76 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
GCN1-208ENST00000551549 CCL20P78556 96 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 RPL19P84098 196 aaKnown RBP6.47□□□□□ -1.37
GCN1-208ENST00000551549 WFDC2Q14508 124 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 LAGE3Q14657 143 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 ZFP82Q8N141 532 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 MLST8Q9BVC4 326 aa6.47□□□□□ -1.37
GCN1-208ENST00000551549 A0A087WWC5 75 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 MUC21A0A0G2JKD1 596 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 MUC21A0A140T8X8 626 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 LECT2O14960 151 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 S100A9P06702 114 aaKnown RBP6.46□□□□□ -1.38
GCN1-208ENST00000551549 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 TMUB2Q71RG4 321 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 BAGE2Q86Y30 109 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
GCN1-208ENST00000551549 DNAJC30Q96LL9 226 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
GCN1-208ENST00000551549 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
GCN1-208ENST00000551549 PFDN1O60925 122 aa6.45□□□□□ -1.38
GCN1-208ENST00000551549 Q5VSD8 79 aa6.45□□□□□ -1.38
GCN1-208ENST00000551549 NIT1Q86X76 327 aa6.45□□□□□ -1.38
GCN1-208ENST00000551549 OR10AG1Q8NH19 301 aa6.45□□□□□ -1.38
GCN1-208ENST00000551549 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 INAFM2P0DMQ5 153 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 RPL35P42766 123 aaKnown RBP6.44□□□□□ -1.38
GCN1-208ENST00000551549 UBE2D3P61077 147 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 SSTP61278 116 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 UBE2D2P62837 147 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 PRR27Q6MZM9 219 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 DERL1Q9BUN8 251 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 GNG13Q9P2W3 67 aa6.44□□□□□ -1.38
GCN1-208ENST00000551549 TRBV7-3A0A075B6L6 115 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 CXCL1P09341 107 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 RAB4BP61018 213 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 EIF5AP63241 154 aaKnown RBP6.43□□□□□ -1.38
GCN1-208ENST00000551549 RPL36AP83881 106 aaKnown RBP6.43□□□□□ -1.38
GCN1-208ENST00000551549 TOR2AQ5JU69 321 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 OR10G8Q8NGN5 311 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 BAALCQ8WXS3 180 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 FRZBQ92765 325 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 RPL36ALQ969Q0 106 aaKnown RBP6.43□□□□□ -1.38
GCN1-208ENST00000551549 TMEM70Q9BUB7 260 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 URGCP-MRPS24S4R325 110 aa6.43□□□□□ -1.38
GCN1-208ENST00000551549 A0A087WX48 190 aa6.42□□□□□ -1.38
GCN1-208ENST00000551549 SNAI2O43623 268 aa6.42□□□□□ -1.38
GCN1-208ENST00000551549 ZNF56Q15929 161 aa6.42□□□□□ -1.38
GCN1-208ENST00000551549 SPANXN1Q5VSR9 72 aa6.42□□□□□ -1.38
GCN1-208ENST00000551549 NEXN-AS1Q8NBZ9 246 aa6.42□□□□□ -1.38
GCN1-208ENST00000551549 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
GCN1-208ENST00000551549 SSBP4Q9BWG4 385 aaPredicted RBP6.42□□□□□ -1.38
GCN1-208ENST00000551549 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.41□□□□□ -1.38
GCN1-208ENST00000551549 IGKV2D-24A0A075B6R9 120 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 RAB19A4D1S5 217 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 F5H697 171 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 IGLV2-8P01709 118 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 OR5AL1P0C617 328 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 GZMBP10144 247 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 CENPWQ5EE01 88 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 KIF25-AS1Q9Y6Z4 181 aa6.41□□□□□ -1.38
GCN1-208ENST00000551549 FAM229AH3BQW9 127 aa6.4□□□□□ -1.38
GCN1-208ENST00000551549 RAB5CP51148 216 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms