RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 STHQ8IWL8 128 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 SMAD5-AS1Q9Y6J3 95 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 ZNF415Q09FC8 603 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 UNQ9165/PRO28630Q6UXU0 137 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 UBE2E2Q96LR5 201 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 SPANXB1Q9NS25 103 aaPredicted RBP7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 FSTL3O95633 263 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 PEMTQ9UBM1 199 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 USP9XQ93008 2570 aaPredicted RBP7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 B5MCH6 92 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 GNLYP22749 145 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 BLCAPP62952 87 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 Q8NA96 180 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 LINC00158P58513 81 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 CCDC140Q96MF4 163 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 MYO18BQ8IUG5 2567 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 B4DSR2 109 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 TRBV12-3P01733 135 aa7.82□□□□□ -1.16
SMARCC2-209ENST00000550164 TRAV26-1A0A087WT03 109 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 COX6B1P14854 86 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 MUSTN1Q8IVN3 82 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 MAPK1IP1LQ8NDC0 245 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 OPRPNQ99935 248 aaPredicted RBP7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 SONP18583 2426 aaKnown RBP7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 COL4A2P08572 1712 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 A0A096LNJ9 63 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 LY6LH3BQJ8 138 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 SRSF2Q01130 221 aaKnown RBP7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 RASL10AQ92737 203 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
SMARCC2-209ENST00000550164 RPL36AP83881 106 aaKnown RBP7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 C15orf53Q8NAA6 179 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 RPL36ALQ969Q0 106 aaKnown RBP7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 UFSP1Q6NVU6 142 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 C5orf56Q8N8D9 126 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 C11orf21Q9P2W6 132 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 ADAMTS20P59510 1910 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 MSMBP08118 114 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 IGF2-ASQ6U949 168 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 CHCHD5Q9BSY4 110 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 XCL2Q9UBD3 114 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 PTPRBP23467 1997 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 IFITM1P13164 125 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 SS18L2Q9UHA2 77 aa7.8□□□□□ -1.16
SMARCC2-209ENST00000550164 LAMA1P25391 3075 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 TRGV4A0A0C4DH28 118 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 CRPP02741 224 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 TCTEX1D4Q5JR98 221 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 TNRC6BQ9UPQ9 1833 aaKnown RBP7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 ODF3BA8MYP8 253 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 LEPROTO15243 131 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 RHOHQ15669 191 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
SMARCC2-209ENST00000550164 NAV2Q8IVL1 2488 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 PAX4O43316 350 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 Q6ZQT7 251 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 TCL1BO95988 128 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 IGHV4-38-2P0DP08 117 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 INSL3P51460 131 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 CRYBA4P53673 196 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 MT-ATP8P03928 68 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 Q8N1Y9 231 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 NEXN-AS1Q8NBZ9 246 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 VPS13AQ96RL7 3174 aa7.78□□□□□ -1.16
SMARCC2-209ENST00000550164 SIRPDQ9H106 197 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 RBMY1BA6NDE4 496 aaKnown RBP7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 RBMY1EA6NEQ0 496 aaKnown RBP7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE12JA6NER3 117 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE7O76087 117 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 RBMY1DP0C7P1 496 aaKnown RBP7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE12FP0CL80 117 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE12GP0CL81 117 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE12IP0CL82 117 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 RBMY1A1P0DJD3 496 aaKnown RBP7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 RBMY1CP0DJD4 496 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE4Q13068 117 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 LINC01620Q4KN68 170 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 NRACQ8N912 160 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 PRO3102Q9H379 93 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 MRPS12O15235 138 aaKnown RBP7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 INSP01308 110 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 MDFICQ9P1T7 246 aa7.77□□□□□ -1.17
SMARCC2-209ENST00000550164 ADORA2A-AS1P86434 159 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE5Q13069 117 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 GAGE6Q13070 117 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 DAND5Q8N907 189 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 C20orf173Q96LM9 149 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 TIMM17AQ99595 171 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 CHD8Q9HCK8 2581 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 IGHV4-61A0A0C4DH41 118 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 RHODO00212 210 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms