RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 LINC00588Q9Y4M8 146 aa8.23□□□□□ -1.09
PFDN5-208ENST00000549995 F2Z2F3 143 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 CCL18P55774 89 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 RHOHQ15669 191 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 ESRGQ1W209 222 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 FER1L6-AS1Q8NA97 138 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 SAMD10Q9BYL1 202 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 RNASE7Q9H1E1 156 aaKnown RBP8.22□□□□□ -1.09
PFDN5-208ENST00000549995 JPT2Q9H910 190 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
PFDN5-208ENST00000549995 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
PFDN5-208ENST00000549995 RAB14P61106 215 aa8.21□□□□□ -1.1
PFDN5-208ENST00000549995 Q6ZR54 194 aa8.21□□□□□ -1.1
PFDN5-208ENST00000549995 SH2D6Q7Z4S9 175 aa8.21□□□□□ -1.1
PFDN5-208ENST00000549995 OSTCQ9NRP0 149 aa8.21□□□□□ -1.1
PFDN5-208ENST00000549995 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
PFDN5-208ENST00000549995 HECTD4Q9Y4D8 3996 aa8.21□□□□□ -1.1
PFDN5-208ENST00000549995 FAM231BA6NCW3 169 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 M0R381 172 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 GZMBP10144 247 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 GYPEP15421 78 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 LINC00315P59091 139 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
PFDN5-208ENST00000549995 CACNG7P62955 275 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 Q6ZSN1 163 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 NEGR1Q7Z3B1 354 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 ISOC2Q96AB3 205 aa8.2□□□□□ -1.1
PFDN5-208ENST00000549995 GATCO43716 136 aaKnown RBP8.19□□□□□ -1.1
PFDN5-208ENST00000549995 SRIP30626 198 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 CEBPGP53567 150 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 TMEM241Q24JQ0 296 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 LYPD5Q6UWN5 251 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 UBE2DNLQ8IWF7 75 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 OR10G8Q8NGN5 311 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 AP1S3Q96PC3 154 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
PFDN5-208ENST00000549995 TRBV10-1A0A0K0K1A3 114 aa8.18□□□□□ -1.1
PFDN5-208ENST00000549995 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
PFDN5-208ENST00000549995 RAB4BP61018 213 aa8.18□□□□□ -1.1
PFDN5-208ENST00000549995 SPANXN1Q5VSR9 72 aa8.18□□□□□ -1.1
PFDN5-208ENST00000549995 LYZL1Q6UWQ5 148 aa8.18□□□□□ -1.1
PFDN5-208ENST00000549995 V9GYV3 84 aa8.18□□□□□ -1.1
PFDN5-208ENST00000549995 PKD1P98161 4303 aa8.17□□□□□ -1.1
PFDN5-208ENST00000549995 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
PFDN5-208ENST00000549995 A8MWL6 223 aa8.17□□□□□ -1.1
PFDN5-208ENST00000549995 ERVFC1-1P60608 527 aa8.17□□□□□ -1.1
PFDN5-208ENST00000549995 SOHLH1Q5JUK2 328 aa8.17□□□□□ -1.1
PFDN5-208ENST00000549995 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
PFDN5-208ENST00000549995 A0A087WWL8 130 aa8.16□□□□□ -1.1
PFDN5-208ENST00000549995 BTF3P20290 206 aaKnown RBP8.16□□□□□ -1.1
PFDN5-208ENST00000549995 FAM74A4Q5TZK3 123 aa8.16□□□□□ -1.1
PFDN5-208ENST00000549995 UQCC3Q6UW78 93 aa8.16□□□□□ -1.1
PFDN5-208ENST00000549995 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
PFDN5-208ENST00000549995 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
PFDN5-208ENST00000549995 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
PFDN5-208ENST00000549995 TRGC1P0CF51 173 aa8.15□□□□□ -1.1
PFDN5-208ENST00000549995 C15orf54Q8N8G6 183 aa8.15□□□□□ -1.1
PFDN5-208ENST00000549995 Q9H8V8 135 aa8.15□□□□□ -1.1
PFDN5-208ENST00000549995 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
PFDN5-208ENST00000549995 Q9UF83 564 aa8.15□□□□□ -1.1
PFDN5-208ENST00000549995 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 MUC21A0A140T8X8 626 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 K7EP13 123 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 NTF3P20783 257 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 UBE2D3P61077 147 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 UBE2D2P62837 147 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
PFDN5-208ENST00000549995 ADIRFQ15847 76 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 GTSF1LQ9H1H1 148 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 DPH3P1Q9H4G8 78 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
PFDN5-208ENST00000549995 LINC00862A6NCI5 91 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 SIVA1O15304 175 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 DNAH10OSP0CZ25 163 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 TTC32Q5I0X7 151 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 ATP6V0E2Q8NHE4 81 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 TPPP3Q9BW30 176 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
PFDN5-208ENST00000549995 TRBV7-3A0A075B6L6 115 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 SMIM27A0A1W2PRY6 76 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 HIGD1CA8MV81 97 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 M0QY20 66 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 EVI2AP22794 236 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 ZNF56Q15929 161 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 LELP1Q5T871 98 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 NEXN-AS1Q8NBZ9 246 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 FRZBQ92765 325 aa8.12□□□□□ -1.11
PFDN5-208ENST00000549995 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 RTL8CO15255 209 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 RPL36AP83881 106 aaKnown RBP8.11□□□□□ -1.11
PFDN5-208ENST00000549995 GAGE1Q13065 139 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 GAGE4Q13068 117 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 GAGE5Q13069 117 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 TWIST1Q15672 202 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
PFDN5-208ENST00000549995 SUMO4Q6EEV6 95 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms