RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CIDEAO60543 219 aa6.6□□□□□ -1.35
HDAC7-229ENST00000549883 BCL2P10415 239 aa6.6□□□□□ -1.35
HDAC7-229ENST00000549883 TIRAPP58753 221 aa6.6□□□□□ -1.35
HDAC7-229ENST00000549883 MEF2BQ02080 365 aaPredicted RBP6.6□□□□□ -1.35
HDAC7-229ENST00000549883 PIK3CD-AS1Q5SR53 167 aa6.6□□□□□ -1.35
HDAC7-229ENST00000549883 SPATA12Q7Z6I5 190 aa6.6□□□□□ -1.35
HDAC7-229ENST00000549883 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
HDAC7-229ENST00000549883 IGHV3-38A0A0C4DH36 116 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 RBFOX3A6NFN3 312 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 C16orf90A8MZG2 172 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 IGHV3-30P01768 117 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 IGHV3-33P01772 117 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 IGHV3-30-3P0DP02 117 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 IGHV3-30-5P0DP03 117 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 ZFP82Q8N141 532 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 SSBP4Q9BWG4 385 aaPredicted RBP6.59□□□□□ -1.35
HDAC7-229ENST00000549883 MED9Q9NWA0 146 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 MSRB1Q9NZV6 116 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 HERC2O95714 4834 aa6.59□□□□□ -1.35
HDAC7-229ENST00000549883 SNAI2O43623 268 aa6.58□□□□□ -1.36
HDAC7-229ENST00000549883 MED14OSP0DP75 135 aa6.58□□□□□ -1.36
HDAC7-229ENST00000549883 BTF3P20290 206 aaKnown RBP6.58□□□□□ -1.36
HDAC7-229ENST00000549883 OR10J3Q5JRS4 329 aa6.58□□□□□ -1.36
HDAC7-229ENST00000549883 LELP1Q5T871 98 aa6.58□□□□□ -1.36
HDAC7-229ENST00000549883 GTSF1LQ9H1H1 148 aa6.58□□□□□ -1.36
HDAC7-229ENST00000549883 VAX2Q9UIW0 290 aa6.58□□□□□ -1.36
HDAC7-229ENST00000549883 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 TEX46H3BTG2 121 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 RHODO00212 210 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 OR5AL1P0C617 328 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 EVI2AP22794 236 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 GNG4P50150 75 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 LINC01556Q5JQF7 62 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 OR2D3Q8NGH3 330 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
HDAC7-229ENST00000549883 TRAV9-2A0A087WT02 112 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 K7EN84 100 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 PDE6DO43924 150 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 IFNA1P01562 189 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 CXCL1P09341 107 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 IGLC6P0CF74 106 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 OCC1Q8TAD7 63 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 DNAJC30Q96LL9 226 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 Q9HAA7 133 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 KIF25-AS1Q9Y6Z4 181 aa6.56□□□□□ -1.36
HDAC7-229ENST00000549883 A0A087WTM6 91 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 ZNF56Q15929 161 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 SPANXN1Q5VSR9 72 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 DAZ4Q86SG3 579 aaKnown RBP6.55□□□□□ -1.36
HDAC7-229ENST00000549883 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 NUDT10Q8NFP7 164 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 LYPD6BQ8NI32 183 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
HDAC7-229ENST00000549883 DAZ3Q9NR90 486 aaKnown RBP6.55□□□□□ -1.36
HDAC7-229ENST00000549883 UBE2D3P61077 147 aa6.54□□□□□ -1.36
HDAC7-229ENST00000549883 UBE2D2P62837 147 aa6.54□□□□□ -1.36
HDAC7-229ENST00000549883 RNASE7Q9H1E1 156 aaKnown RBP6.54□□□□□ -1.36
HDAC7-229ENST00000549883 LRCOL1A6NCL2 159 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 F5H697 171 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 P01737 135 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 ERVFC1-1P60608 527 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 RAB4BP61018 213 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 BLOC1S1P78537 153 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 WFDC2Q14508 124 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 LYZL1Q6UWQ5 148 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 DAZAP1Q96EP5 407 aaKnown RBP6.53□□□□□ -1.36
HDAC7-229ENST00000549883 LRP1BQ9NZR2 4599 aa6.53□□□□□ -1.36
HDAC7-229ENST00000549883 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 K7EP13 123 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 CEBPGP53567 150 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
HDAC7-229ENST00000549883 NIT1Q86X76 327 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 OR10G8Q8NGN5 311 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 DEFB104AQ8WTQ1 72 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
HDAC7-229ENST00000549883 SMIM12Q96EX1 92 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 HSPG2P98160 4391 aa6.52□□□□□ -1.37
HDAC7-229ENST00000549883 A0A087WWC5 75 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 MGPP08493 103 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 NTF3P20783 257 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 TAGLN2P37802 199 aaKnown RBP6.51□□□□□ -1.37
HDAC7-229ENST00000549883 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 RPS20P60866 119 aaKnown RBP6.51□□□□□ -1.37
HDAC7-229ENST00000549883 SUMO4Q6EEV6 95 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 NTM-AS1Q6ZSK4 140 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 AP1S3Q96PC3 154 aa6.51□□□□□ -1.37
HDAC7-229ENST00000549883 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
HDAC7-229ENST00000549883 TMEM250H0YL14 139 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms