RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GTSF1Q8WW33 167 aa14.24□□□□□ -0.13
HMGA2-211ENST00000545998 A0A096LPF7 62 aa14.23□□□□□ -0.13
HMGA2-211ENST00000545998 A8MWL6 223 aa14.23□□□□□ -0.13
HMGA2-211ENST00000545998 CTRLP40313 264 aa14.23□□□□□ -0.13
HMGA2-211ENST00000545998 SSTP61278 116 aa14.23□□□□□ -0.13
HMGA2-211ENST00000545998 A0A087WWL8 130 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 RHODO00212 210 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 CACNG7P62955 275 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 Q6ZSN1 163 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 SLC25A29Q8N8R3 303 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 TRBV6-4A0A1B0GX49 114 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 LINC00862A6NCI5 91 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 FAM74A4Q5TZK3 123 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 COMMD7Q86VX2 200 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 C15orf54Q8N8G6 183 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 CNFNQ9BYD5 112 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 ICOSQ9Y6W8 199 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 V9GYV3 84 aa14.22□□□□□ -0.13
HMGA2-211ENST00000545998 GYPEP15421 78 aa14.21□□□□□ -0.14
HMGA2-211ENST00000545998 WDR73Q6P4I2 378 aa14.21□□□□□ -0.14
HMGA2-211ENST00000545998 TSKUQ8WUA8 353 aa14.21□□□□□ -0.14
HMGA2-211ENST00000545998 MSRB1Q9NZV6 116 aa14.21□□□□□ -0.14
HMGA2-211ENST00000545998 K7EQD1 137 aa14.2□□□□□ -0.14
HMGA2-211ENST00000545998 FOXA3P55318 350 aaPredicted RBP14.2□□□□□ -0.14
HMGA2-211ENST00000545998 RHOHQ15669 191 aa14.2□□□□□ -0.14
HMGA2-211ENST00000545998 OR10G8Q8NGN5 311 aa14.2□□□□□ -0.14
HMGA2-211ENST00000545998 LOC100131303A0A0U1RQF7 123 aa14.19□□□□□ -0.14
HMGA2-211ENST00000545998 MRPL23Q16540 153 aaKnown RBP14.19□□□□□ -0.14
HMGA2-211ENST00000545998 RNF212Q495C1 297 aa14.19□□□□□ -0.14
HMGA2-211ENST00000545998 AP1S3Q96PC3 154 aa14.19□□□□□ -0.14
HMGA2-211ENST00000545998 GFRA4Q9GZZ7 299 aa14.19□□□□□ -0.14
HMGA2-211ENST00000545998 TMEM218A2RU14 115 aa14.18□□□□□ -0.14
HMGA2-211ENST00000545998 NTF3P20783 257 aa14.18□□□□□ -0.14
HMGA2-211ENST00000545998 C14orf178Q8N769 122 aaPredicted RBP14.18□□□□□ -0.14
HMGA2-211ENST00000545998 PRADC1Q9BSG0 188 aa14.18□□□□□ -0.14
HMGA2-211ENST00000545998 KIF25-AS1Q9Y6Z4 181 aa14.18□□□□□ -0.14
HMGA2-211ENST00000545998 FAM231BA6NCW3 169 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 UBE2DNLQ8IWF7 75 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 ADCYAP1P18509 176 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 CCL18P55774 89 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 ESRGQ1W209 222 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 PGLYRP4Q96LB8 373 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 LINC00588Q9Y4M8 146 aa14.17□□□□□ -0.14
HMGA2-211ENST00000545998 HIGD1CA8MV81 97 aa14.16□□□□□ -0.14
HMGA2-211ENST00000545998 SRIP30626 198 aa14.16□□□□□ -0.14
HMGA2-211ENST00000545998 PNRC1Q12796 327 aaPredicted RBP14.16□□□□□ -0.14
HMGA2-211ENST00000545998 SMIM17P0DL12 118 aa14.15□□□□□ -0.14
HMGA2-211ENST00000545998 LINC00315P59091 139 aa14.15□□□□□ -0.14
HMGA2-211ENST00000545998 TWIST1Q15672 202 aa14.15□□□□□ -0.14
HMGA2-211ENST00000545998 NEGR1Q7Z3B1 354 aa14.15□□□□□ -0.14
HMGA2-211ENST00000545998 TRGC1P0CF51 173 aa14.14□□□□□ -0.15
HMGA2-211ENST00000545998 RAB4BP61018 213 aa14.14□□□□□ -0.15
HMGA2-211ENST00000545998 Q9UF83 564 aa14.14□□□□□ -0.15
HMGA2-211ENST00000545998 EVI2AP22794 236 aa14.13□□□□□ -0.15
HMGA2-211ENST00000545998 FAM3BP58499 235 aaPredicted RBP14.13□□□□□ -0.15
HMGA2-211ENST00000545998 ZNF56Q15929 161 aa14.13□□□□□ -0.15
HMGA2-211ENST00000545998 F8W036 122 aa14.13□□□□□ -0.15
HMGA2-211ENST00000545998 SH2D6Q7Z4S9 175 aa14.13□□□□□ -0.15
HMGA2-211ENST00000545998 DNAH2Q9P225 4427 aa14.12□□□□□ -0.15
HMGA2-211ENST00000545998 SMIM27A0A1W2PRY6 76 aa14.12□□□□□ -0.15
HMGA2-211ENST00000545998 LYPD5Q6UWN5 251 aa14.12□□□□□ -0.15
HMGA2-211ENST00000545998 NUP35Q8NFH5 326 aa14.12□□□□□ -0.15
HMGA2-211ENST00000545998 SEC11CQ9BY50 192 aa14.12□□□□□ -0.15
HMGA2-211ENST00000545998 A0A1B0GUT8 65 aa14.11□□□□□ -0.15
HMGA2-211ENST00000545998 LINC00694P0DN24 101 aa14.11□□□□□ -0.15
HMGA2-211ENST00000545998 DPH3P1Q9H4G8 78 aa14.11□□□□□ -0.15
HMGA2-211ENST00000545998 NAT8BQ9UHF3 227 aa14.11□□□□□ -0.15
HMGA2-211ENST00000545998 TRBV10-1A0A0K0K1A3 114 aa14.1□□□□□ -0.15
HMGA2-211ENST00000545998 F5H697 171 aa14.1□□□□□ -0.15
HMGA2-211ENST00000545998 PPP1R2P9O14990 202 aa14.1□□□□□ -0.15
HMGA2-211ENST00000545998 ZNRF2Q8NHG8 242 aa14.1□□□□□ -0.15
HMGA2-211ENST00000545998 BORCS7Q96B45 105 aa14.1□□□□□ -0.15
HMGA2-211ENST00000545998 MRPS16Q9Y3D3 137 aaKnown RBP14.1□□□□□ -0.15
HMGA2-211ENST00000545998 FRAS1Q86XX4 4008 aa14.1□□□□□ -0.15
HMGA2-211ENST00000545998 GAGE12JA6NER3 117 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 MGPP08493 103 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 GAGE1Q13065 139 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 GAGE4Q13068 117 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 GAGE5Q13069 117 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 GAGE13Q4V321 117 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 UPK3BQ9BT76 320 aa14.09□□□□□ -0.15
HMGA2-211ENST00000545998 MT-ND4LP03901 98 aa14.08□□□□□ -0.16
HMGA2-211ENST00000545998 C10orf91Q5T1B1 145 aa14.08□□□□□ -0.16
HMGA2-211ENST00000545998 ANAPC16Q96DE5 110 aa14.08□□□□□ -0.16
HMGA2-211ENST00000545998 TIRAPP58753 221 aa14.07□□□□□ -0.16
HMGA2-211ENST00000545998 SUMO4Q6EEV6 95 aa14.07□□□□□ -0.16
HMGA2-211ENST00000545998 SMIM15Q7Z3B0 74 aa14.07□□□□□ -0.16
HMGA2-211ENST00000545998 ATP6V0E2Q8NHE4 81 aa14.07□□□□□ -0.16
HMGA2-211ENST00000545998 DNAH10Q8IVF4 4471 aa14.06□□□□□ -0.16
HMGA2-211ENST00000545998 NEXN-AS1Q8NBZ9 246 aa14.06□□□□□ -0.16
HMGA2-211ENST00000545998 TRBV7-3A0A075B6L6 115 aa14.05□□□□□ -0.16
HMGA2-211ENST00000545998 M0QY20 66 aa14.05□□□□□ -0.16
HMGA2-211ENST00000545998 RPL36AP83881 106 aaKnown RBP14.05□□□□□ -0.16
HMGA2-211ENST00000545998 RIGQ13278 110 aa14.05□□□□□ -0.16
HMGA2-211ENST00000545998 RPL36ALQ969Q0 106 aaKnown RBP14.05□□□□□ -0.16
HMGA2-211ENST00000545998 GTSF1LQ9H1H1 148 aa14.05□□□□□ -0.16
HMGA2-211ENST00000545998 Q9H8V8 135 aa14.05□□□□□ -0.16
HMGA2-211ENST00000545998 CARHSP1Q9Y2V2 147 aaKnown RBP14.05□□□□□ -0.16
HMGA2-211ENST00000545998 IGLV2-18A0A075B6J9 118 aa14.04□□□□□ -0.16
HMGA2-211ENST00000545998 UBE2D3P61077 147 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms