RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 LINC00315P59091 139 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 TNP2Q05952 138 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 GAGE1Q13065 139 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 GAGE4Q13068 117 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 GAGE5Q13069 117 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 SPANXN1Q5VSR9 72 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 Q6ZSN1 163 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 SNAI2O43623 268 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 IGLV2-8P01709 118 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 P01737 135 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 DNAH10OSP0CZ25 163 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 LELP1Q5T871 98 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 NFE4Q86UQ8 179 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 C10orf126Q8N4M7 172 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 OR2D3Q8NGH3 330 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 OR10AG1Q8NH19 301 aa9.04□□□□□ -0.96
DDX55-213ENST00000545042 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
DDX55-213ENST00000545042 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
DDX55-213ENST00000545042 RBFOX3A6NFN3 312 aa9.03□□□□□ -0.96
DDX55-213ENST00000545042 CRYGDP07320 174 aa9.03□□□□□ -0.96
DDX55-213ENST00000545042 C14orf178Q8N769 122 aaPredicted RBP9.03□□□□□ -0.96
DDX55-213ENST00000545042 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.97
DDX55-213ENST00000545042 TMEM250H0YL14 139 aa9.02□□□□□ -0.97
DDX55-213ENST00000545042 SMIM17P0DL12 118 aa9.02□□□□□ -0.97
DDX55-213ENST00000545042 FER1L6-AS1Q8NA97 138 aa9.02□□□□□ -0.97
DDX55-213ENST00000545042 LYPD6BQ8NI32 183 aa9.02□□□□□ -0.97
DDX55-213ENST00000545042 TPPP3Q9BW30 176 aa9.02□□□□□ -0.97
DDX55-213ENST00000545042 TRBV20OR9-2A0A075B6H5 130 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 A0A087WWC5 75 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 RAB4BP61018 213 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 SSTP61278 116 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 RPL36AP83881 106 aaKnown RBP9.01□□□□□ -0.97
DDX55-213ENST00000545042 ZNF56Q15929 161 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 LINC01556Q5JQF7 62 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 RPL36ALQ969Q0 106 aaKnown RBP9.01□□□□□ -0.97
DDX55-213ENST00000545042 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 EIF5A2Q9GZV4 153 aaKnown RBP9.01□□□□□ -0.97
DDX55-213ENST00000545042 MSRB1Q9NZV6 116 aa9.01□□□□□ -0.97
DDX55-213ENST00000545042 PKHD1P08F94 4074 aa9□□□□□ -0.97
DDX55-213ENST00000545042 F2Z2F3 143 aa9□□□□□ -0.97
DDX55-213ENST00000545042 F5H697 171 aa9□□□□□ -0.97
DDX55-213ENST00000545042 GZMBP10144 247 aa9□□□□□ -0.97
DDX55-213ENST00000545042 CACNG7P62955 275 aa9□□□□□ -0.97
DDX55-213ENST00000545042 TOR2AQ5JU69 321 aa9□□□□□ -0.97
DDX55-213ENST00000545042 PKD1P98161 4303 aa9□□□□□ -0.97
DDX55-213ENST00000545042 EREGO14944 169 aa8.99□□□□□ -0.97
DDX55-213ENST00000545042 IGLC6P0CF74 106 aa8.99□□□□□ -0.97
DDX55-213ENST00000545042 CEBPGP53567 150 aa8.99□□□□□ -0.97
DDX55-213ENST00000545042 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.99□□□□□ -0.97
DDX55-213ENST00000545042 Q9UF83 564 aa8.99□□□□□ -0.97
DDX55-213ENST00000545042 TRBV7-3A0A075B6L6 115 aa8.98□□□□□ -0.97
DDX55-213ENST00000545042 ERVFC1-1P60608 527 aa8.98□□□□□ -0.97
DDX55-213ENST00000545042 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
DDX55-213ENST00000545042 NUDT10Q8NFP7 164 aa8.98□□□□□ -0.97
DDX55-213ENST00000545042 OCC1Q8TAD7 63 aa8.98□□□□□ -0.97
DDX55-213ENST00000545042 NUDT11Q96G61 164 aa8.98□□□□□ -0.97
DDX55-213ENST00000545042 TNFRSF18Q9Y5U5 241 aa8.98□□□□□ -0.97
DDX55-213ENST00000545042 C16orf90A8MZG2 172 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 NDUFS6O75380 124 aaKnown RBP8.97□□□□□ -0.97
DDX55-213ENST00000545042 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 IGHV3-30-3P0DP02 117 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 OR10G8Q8NGN5 311 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 FAM210AQ96ND0 272 aa8.97□□□□□ -0.97
DDX55-213ENST00000545042 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
DDX55-213ENST00000545042 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 K7EN84 100 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 TRGC1P0CF51 173 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 UBE2D3P61077 147 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 UBE2D2P62837 147 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 LYZL1Q6UWQ5 148 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 SMIM7Q9BQ49 75 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.98
DDX55-213ENST00000545042 URGCP-MRPS24S4R325 110 aa8.96□□□□□ -0.98
DDX55-213ENST00000545042 H7C1H1 209 aa8.95□□□□□ -0.98
DDX55-213ENST00000545042 PSCAO43653 123 aa8.95□□□□□ -0.98
DDX55-213ENST00000545042 MGPP08493 103 aa8.95□□□□□ -0.98
DDX55-213ENST00000545042 WDR73Q6P4I2 378 aa8.95□□□□□ -0.98
DDX55-213ENST00000545042 KCNIP4Q6PIL6 250 aa8.95□□□□□ -0.98
DDX55-213ENST00000545042 NEXN-AS1Q8NBZ9 246 aa8.95□□□□□ -0.98
DDX55-213ENST00000545042 GATCO43716 136 aaKnown RBP8.94□□□□□ -0.98
DDX55-213ENST00000545042 CTRLP40313 264 aa8.94□□□□□ -0.98
DDX55-213ENST00000545042 LAGE3Q14657 143 aa8.94□□□□□ -0.98
DDX55-213ENST00000545042 TEX261Q6UWH6 196 aa8.94□□□□□ -0.98
DDX55-213ENST00000545042 Q9HAA7 133 aa8.94□□□□□ -0.98
DDX55-213ENST00000545042 KIF25-AS1Q9Y6Z4 181 aa8.94□□□□□ -0.98
DDX55-213ENST00000545042 ZNF727A8MUV8 499 aa8.93□□□□□ -0.98
DDX55-213ENST00000545042 A8MWL6 223 aa8.93□□□□□ -0.98
DDX55-213ENST00000545042 NTF3P20783 257 aa8.93□□□□□ -0.98
DDX55-213ENST00000545042 TWIST1Q15672 202 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms