RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 FHAD1B1AJZ9 1412 aa0.61□□□□□ -2.31
LEMD3-206ENST00000545026 KIAA0100Q14667 2235 aaKnown RBP0.61□□□□□ -2.31
LEMD3-206ENST00000545026 TNCP24821 2201 aa0.6□□□□□ -2.31
LEMD3-206ENST00000545026 KIF13AQ9H1H9 1805 aa0.6□□□□□ -2.31
LEMD3-206ENST00000545026 TSTD1Q8NFU3 115 aa0.6□□□□□ -2.31
LEMD3-206ENST00000545026 ADGRB1O14514 1584 aa0.59□□□□□ -2.31
LEMD3-206ENST00000545026 TRAV12-3A0A0B4J271 114 aa0.59□□□□□ -2.31
LEMD3-206ENST00000545026 RBAKDNA6NC62 111 aa0.59□□□□□ -2.31
LEMD3-206ENST00000545026 MUC5ACP98088 5654 aa0.59□□□□□ -2.32
LEMD3-206ENST00000545026 TTC28Q96AY4 2481 aa0.59□□□□□ -2.32
LEMD3-206ENST00000545026 K7ERU9 68 aa0.58□□□□□ -2.32
LEMD3-206ENST00000545026 PIRTP0C851 137 aa0.58□□□□□ -2.32
LEMD3-206ENST00000545026 SPCS2Q15005 226 aa0.58□□□□□ -2.32
LEMD3-206ENST00000545026 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
LEMD3-206ENST00000545026 Q6ZUT4 128 aa0.58□□□□□ -2.32
LEMD3-206ENST00000545026 F5P12259 2224 aa0.58□□□□□ -2.32
LEMD3-206ENST00000545026 F2Z2F3 143 aa0.57□□□□□ -2.32
LEMD3-206ENST00000545026 NPFFO15130 113 aa0.57□□□□□ -2.32
LEMD3-206ENST00000545026 SSBP1Q04837 148 aaKnown RBP0.57□□□□□ -2.32
LEMD3-206ENST00000545026 SPANXN1Q5VSR9 72 aa0.57□□□□□ -2.32
LEMD3-206ENST00000545026 C20orf197Q8N268 126 aa0.57□□□□□ -2.32
LEMD3-206ENST00000545026 MYH13Q9UKX3 1938 aa0.57□□□□□ -2.32
LEMD3-206ENST00000545026 TPRP12270 2363 aaKnown RBP0.57□□□□□ -2.32
LEMD3-206ENST00000545026 MACF1Q9UPN3 7388 aaKnown RBP0.57□□□□□ -2.32
LEMD3-206ENST00000545026 SMCO1Q147U7 214 aa0.56□□□□□ -2.32
LEMD3-206ENST00000545026 SLC48A1Q6P1K1 146 aa0.56□□□□□ -2.32
LEMD3-206ENST00000545026 VMO1Q7Z5L0 202 aa0.56□□□□□ -2.32
LEMD3-206ENST00000545026 C4orf33Q8N1A6 199 aa0.56□□□□□ -2.32
LEMD3-206ENST00000545026 PROK2Q9HC23 129 aa0.56□□□□□ -2.32
LEMD3-206ENST00000545026 COX7B2Q8TF08 81 aa0.55□□□□□ -2.32
LEMD3-206ENST00000545026 PRR15LQ9BU68 103 aa0.55□□□□□ -2.32
LEMD3-206ENST00000545026 BPESC1Q9GZL8 116 aa0.55□□□□□ -2.32
LEMD3-206ENST00000545026 KDM6BO15054 1643 aa0.55□□□□□ -2.32
LEMD3-206ENST00000545026 COX4I1P13073 169 aa0.54□□□□□ -2.32
LEMD3-206ENST00000545026 ABCA12Q86UK0 2595 aa0.54□□□□□ -2.32
LEMD3-206ENST00000545026 CDK13Q14004 1512 aaKnown RBP0.54□□□□□ -2.32
LEMD3-206ENST00000545026 POLQO75417 2590 aa0.53□□□□□ -2.32
LEMD3-206ENST00000545026 GVQW2A0A096LPI5 108 aaPredicted RBP0.53□□□□□ -2.32
LEMD3-206ENST00000545026 RPS25P62851 125 aaKnown RBP0.53□□□□□ -2.32
LEMD3-206ENST00000545026 PSMG3Q9BT73 122 aaPredicted RBP0.53□□□□□ -2.32
LEMD3-206ENST00000545026 TMEM2Q9UHN6 1383 aa0.53□□□□□ -2.32
LEMD3-206ENST00000545026 ZFYVE26Q68DK2 2539 aa0.53□□□□□ -2.33
LEMD3-206ENST00000545026 TNS1Q9HBL0 1735 aaKnown RBP0.52□□□□□ -2.33
LEMD3-206ENST00000545026 VIRMAQ69YN4 1812 aaKnown RBP0.52□□□□□ -2.33
LEMD3-206ENST00000545026 C9orf116Q5BN46 136 aaPredicted RBP0.52□□□□□ -2.33
LEMD3-206ENST00000545026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.52□□□□□ -2.33
LEMD3-206ENST00000545026 Q96NJ1 140 aa0.52□□□□□ -2.33
LEMD3-206ENST00000545026 TPT1P8Q9HAU6 139 aa0.52□□□□□ -2.33
LEMD3-206ENST00000545026 PLXNA1Q9UIW2 1896 aa0.52□□□□□ -2.33
LEMD3-206ENST00000545026 SOGA1O94964 1423 aa0.51□□□□□ -2.33
LEMD3-206ENST00000545026 RRAS2P62070 204 aaPredicted RBP0.51□□□□□ -2.33
LEMD3-206ENST00000545026 MYO7AQ13402 2215 aa0.51□□□□□ -2.33
LEMD3-206ENST00000545026 FAM74A4Q5TZK3 123 aa0.51□□□□□ -2.33
LEMD3-206ENST00000545026 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
LEMD3-206ENST00000545026 COPZ1P61923 177 aa0.5□□□□□ -2.33
LEMD3-206ENST00000545026 SCIMPQ6UWF3 145 aa0.5□□□□□ -2.33
LEMD3-206ENST00000545026 C10orf82Q8WW14 230 aa0.5□□□□□ -2.33
LEMD3-206ENST00000545026 MUC22E2RYF6 1773 aaPredicted RBP0.5□□□□□ -2.33
LEMD3-206ENST00000545026 SMIM11BQ8TCY0 68 aa0.49□□□□□ -2.33
LEMD3-206ENST00000545026 TMEM242Q9NWH2 141 aa0.49□□□□□ -2.33
LEMD3-206ENST00000545026 V9GYV3 84 aa0.49□□□□□ -2.33
LEMD3-206ENST00000545026 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
LEMD3-206ENST00000545026 LAMB1P07942 1786 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 MAST4O15021 2626 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 TRBV7-1A0A0A6YYK4 115 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 IL5P05113 134 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 UBE2G1P62253 170 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 SDF2Q99470 211 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 PFDN5Q99471 154 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 RPRMQ9NS64 109 aa0.48□□□□□ -2.33
LEMD3-206ENST00000545026 MYH6P13533 1939 aa0.47□□□□□ -2.33
LEMD3-206ENST00000545026 RPL7L1Q6DKI1 246 aaKnown RBP0.47□□□□□ -2.33
LEMD3-206ENST00000545026 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
LEMD3-206ENST00000545026 AKAP11Q9UKA4 1901 aa0.46□□□□□ -2.34
LEMD3-206ENST00000545026 PHIPQ8WWQ0 1821 aa0.46□□□□□ -2.34
LEMD3-206ENST00000545026 NRXN2Q9P2S2 1712 aa0.46□□□□□ -2.34
LEMD3-206ENST00000545026 SSC5DA1L4H1 1573 aa0.45□□□□□ -2.34
LEMD3-206ENST00000545026 PIPP12273 146 aaPredicted RBP0.45□□□□□ -2.34
LEMD3-206ENST00000545026 GUCA1AP43080 201 aaPredicted RBP0.45□□□□□ -2.34
LEMD3-206ENST00000545026 UBE2D1P51668 147 aa0.45□□□□□ -2.34
LEMD3-206ENST00000545026 TMEM191AQ9H0A3 160 aa0.45□□□□□ -2.34
LEMD3-206ENST00000545026 FSIP2Q5CZC0 6907 aa0.45□□□□□ -2.34
LEMD3-206ENST00000545026 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
LEMD3-206ENST00000545026 TCEAL4Q96EI5 215 aa0.44□□□□□ -2.34
LEMD3-206ENST00000545026 DAPK1P53355 1430 aa0.44□□□□□ -2.34
LEMD3-206ENST00000545026 LAMC3Q9Y6N6 1575 aa0.44□□□□□ -2.34
LEMD3-206ENST00000545026 CADP27708 2225 aa0.44□□□□□ -2.34
LEMD3-206ENST00000545026 CLPSL1A2RUU4 121 aa0.43□□□□□ -2.34
LEMD3-206ENST00000545026 A6NIN4 97 aa0.43□□□□□ -2.34
LEMD3-206ENST00000545026 PAIP2BQ9ULR5 123 aaKnown RBP0.43□□□□□ -2.34
LEMD3-206ENST00000545026 ANK2Q01484 3957 aa0.43□□□□□ -2.34
LEMD3-206ENST00000545026 IBTKQ9P2D0 1353 aaPredicted RBP0.43□□□□□ -2.34
LEMD3-206ENST00000545026 IFNA17P01571 189 aa0.42□□□□□ -2.34
LEMD3-206ENST00000545026 APODP05090 189 aa0.42□□□□□ -2.34
LEMD3-206ENST00000545026 ACYP2P14621 99 aa0.42□□□□□ -2.34
LEMD3-206ENST00000545026 EDDM3BP56851 147 aa0.42□□□□□ -2.34
LEMD3-206ENST00000545026 KCNRGQ8N5I3 272 aa0.42□□□□□ -2.34
LEMD3-206ENST00000545026 KMT2DO14686 5537 aa0.42□□□□□ -2.34
LEMD3-206ENST00000545026 MYOM3Q5VTT5 1437 aa0.41□□□□□ -2.34
LEMD3-206ENST00000545026 PTPRZ1P23471 2315 aaPredicted RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms