RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 OR5AL1P0C617 328 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 HOXA5P20719 270 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 RNF212Q495C1 297 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 LYZL1Q6UWQ5 148 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 SYT8Q8NBV8 401 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 GTSF1Q8WW33 167 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 PTH2Q96A98 100 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 V9GYV3 84 aa8.7□□□□□ -1.02
ACTN1-206ENST00000544964 TRAV4A0A0B4J268 109 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 A8MWL6 223 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 RS1O15537 224 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 CT83Q5H943 113 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 SPANXN1Q5VSR9 72 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 SLC7A5P1Q8MH63 180 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 ZFP82Q8N141 532 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 OR4C5Q8NGB2 326 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 SEC11CQ9BY50 192 aa8.69□□□□□ -1.02
ACTN1-206ENST00000544964 IGHV3-73A0A0B4J1V6 119 aa8.68□□□□□ -1.02
ACTN1-206ENST00000544964 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
ACTN1-206ENST00000544964 PNRC1Q12796 327 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-206ENST00000544964 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
ACTN1-206ENST00000544964 TSKUQ8WUA8 353 aa8.68□□□□□ -1.02
ACTN1-206ENST00000544964 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
ACTN1-206ENST00000544964 TRGV4A0A0C4DH28 118 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 NXPH4O95158 308 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 CTRLP40313 264 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 FHL2Q14192 279 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 C15orf53Q8NAA6 179 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 SAMD10Q9BYL1 202 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
ACTN1-206ENST00000544964 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
ACTN1-206ENST00000544964 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 A0A087WWL8 130 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 A0A0J9YY99 117 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 A8MWV9 139 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 F2Z2F3 143 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 CACNG7P62955 275 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 C10orf91Q5T1B1 145 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
ACTN1-206ENST00000544964 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
ACTN1-206ENST00000544964 CRYGDP07320 174 aa8.65□□□□□ -1.02
ACTN1-206ENST00000544964 NTF3P20783 257 aa8.65□□□□□ -1.02
ACTN1-206ENST00000544964 FAM3BP58499 235 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-206ENST00000544964 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
ACTN1-206ENST00000544964 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
ACTN1-206ENST00000544964 CARHSP1Q9Y2V2 147 aaKnown RBP8.65□□□□□ -1.02
ACTN1-206ENST00000544964 SMIM27A0A1W2PRY6 76 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 A6NJY4 79 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-206ENST00000544964 TWIST1Q15672 202 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 UFSP1Q6NVU6 142 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 Q6ZSN1 163 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-206ENST00000544964 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 VSIG2Q96IQ7 327 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
ACTN1-206ENST00000544964 DNAH5Q8TE73 4624 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 PAX4O43316 350 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 APOC3P02656 99 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 GATA1P15976 413 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-206ENST00000544964 CRYBA4P53673 196 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 TNP2Q05952 138 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 PRO0255Q9UI72 69 aa8.63□□□□□ -1.03
ACTN1-206ENST00000544964 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 RHODO00212 210 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 CIDEAO60543 219 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 NUDT3O95989 172 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 EVI2AP22794 236 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
ACTN1-206ENST00000544964 LOC100131303A0A0U1RQF7 123 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 MGPP08493 103 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 TRGC1P0CF51 173 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 SMIM17P0DL12 118 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 SLAQ13239 276 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 ZNF56Q15929 161 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 SLC25A29Q8N8R3 303 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
ACTN1-206ENST00000544964 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
ACTN1-206ENST00000544964 F5H697 171 aa8.6□□□□□ -1.03
ACTN1-206ENST00000544964 GYPEP15421 78 aa8.6□□□□□ -1.03
ACTN1-206ENST00000544964 LINC00315P59091 139 aa8.6□□□□□ -1.03
ACTN1-206ENST00000544964 CTDSP1Q9GZU7 261 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms