RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
TSFM-208ENST00000543727 CRYGDP07320 174 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 CTRLP40313 264 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 SAMD10Q9BYL1 202 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 RNASE7Q9H1E1 156 aaKnown RBP12.33□□□□□ -0.44
TSFM-208ENST00000543727 Q9H8V8 135 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 JPT2Q9H910 190 aa12.33□□□□□ -0.44
TSFM-208ENST00000543727 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
TSFM-208ENST00000543727 TRBV10-1A0A0K0K1A3 114 aa12.32□□□□□ -0.44
TSFM-208ENST00000543727 CNFNQ9BYD5 112 aa12.32□□□□□ -0.44
TSFM-208ENST00000543727 A0A087WWL8 130 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 NBDYA0A0U1RRE5 68 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 A8MWL6 223 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 K7EP13 123 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 SMIM17P0DL12 118 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 GZMBP10144 247 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
TSFM-208ENST00000543727 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 RAB4BP61018 213 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 VPS13DQ5THJ4 4388 aa12.31□□□□□ -0.44
TSFM-208ENST00000543727 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
TSFM-208ENST00000543727 LOC100131303A0A0U1RQF7 123 aa12.3□□□□□ -0.44
TSFM-208ENST00000543727 GATCO43716 136 aaKnown RBP12.3□□□□□ -0.44
TSFM-208ENST00000543727 TMEM241Q24JQ0 296 aa12.3□□□□□ -0.44
TSFM-208ENST00000543727 SOHLH1Q5JUK2 328 aa12.3□□□□□ -0.44
TSFM-208ENST00000543727 CLLU1Q5K131 121 aa12.3□□□□□ -0.44
TSFM-208ENST00000543727 OSTCQ9NRP0 149 aa12.3□□□□□ -0.44
TSFM-208ENST00000543727 SIVA1O15304 175 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 LINC00694P0DN24 101 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 Q6ZSN1 163 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 C15orf54Q8N8G6 183 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 GFRA4Q9GZZ7 299 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
TSFM-208ENST00000543727 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
TSFM-208ENST00000543727 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
TSFM-208ENST00000543727 LINC00336Q6ZUF6 198 aa12.28□□□□□ -0.44
TSFM-208ENST00000543727 ATP6V0E2Q8NHE4 81 aa12.28□□□□□ -0.44
TSFM-208ENST00000543727 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
TSFM-208ENST00000543727 C9JQL5 133 aa12.27□□□□□ -0.45
TSFM-208ENST00000543727 M0R2N4 97 aa12.27□□□□□ -0.45
TSFM-208ENST00000543727 FOXA3P55318 350 aaPredicted RBP12.27□□□□□ -0.45
TSFM-208ENST00000543727 SRSF3P84103 164 aaKnown RBP12.27□□□□□ -0.45
TSFM-208ENST00000543727 ZNF56Q15929 161 aa12.27□□□□□ -0.45
TSFM-208ENST00000543727 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.45
TSFM-208ENST00000543727 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
TSFM-208ENST00000543727 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
TSFM-208ENST00000543727 MUC21A0A140T8X8 626 aa12.26□□□□□ -0.45
TSFM-208ENST00000543727 RPL36AP83881 106 aaKnown RBP12.26□□□□□ -0.45
TSFM-208ENST00000543727 OR10G8Q8NGN5 311 aa12.26□□□□□ -0.45
TSFM-208ENST00000543727 RPL36ALQ969Q0 106 aaKnown RBP12.26□□□□□ -0.45
TSFM-208ENST00000543727 ISOC2Q96AB3 205 aa12.26□□□□□ -0.45
TSFM-208ENST00000543727 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
TSFM-208ENST00000543727 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 A0A087WWC5 75 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 H7C1H1 209 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 NTF3P20783 257 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 RPL23P62829 140 aaKnown RBP12.25□□□□□ -0.45
TSFM-208ENST00000543727 LELP1Q5T871 98 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 C1orf134Q5TEV5 83 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 TSKUQ8WUA8 353 aa12.25□□□□□ -0.45
TSFM-208ENST00000543727 TRAV9-2A0A087WT02 112 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 TRAV8-6A0A0B4J262 113 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 GAGE1Q13065 139 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 GAGE4Q13068 117 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 GAGE5Q13069 117 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 ADIRFQ15847 76 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 BORCS7Q96B45 105 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 DPH3P1Q9H4G8 78 aa12.24□□□□□ -0.45
TSFM-208ENST00000543727 F5H697 171 aa12.23□□□□□ -0.45
TSFM-208ENST00000543727 DNAH10OSP0CZ25 163 aa12.23□□□□□ -0.45
TSFM-208ENST00000543727 IFITM2Q01629 132 aa12.23□□□□□ -0.45
TSFM-208ENST00000543727 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.23□□□□□ -0.45
TSFM-208ENST00000543727 EVI2AP22794 236 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 LINC00315P59091 139 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 SSTP61278 116 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 TWIST1Q15672 202 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 C6orf223Q8N319 242 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 C10orf126Q8N4M7 172 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 MSRB1Q9NZV6 116 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 V9GYV3 84 aa12.22□□□□□ -0.45
TSFM-208ENST00000543727 IGHV3-38A0A0C4DH36 116 aa12.21□□□□□ -0.45
TSFM-208ENST00000543727 UBE2D3P61077 147 aa12.21□□□□□ -0.45
TSFM-208ENST00000543727 UBE2D2P62837 147 aa12.21□□□□□ -0.45
TSFM-208ENST00000543727 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
TSFM-208ENST00000543727 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
TSFM-208ENST00000543727 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
TSFM-208ENST00000543727 LINC01556Q5JQF7 62 aa12.2□□□□□ -0.46
TSFM-208ENST00000543727 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
TSFM-208ENST00000543727 WFDC10BQ8IUB3 73 aa12.2□□□□□ -0.46
TSFM-208ENST00000543727 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
TSFM-208ENST00000543727 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
TSFM-208ENST00000543727 RTL8CO15255 209 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms