RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 UBL5Q9BZL1 73 aa14.98□□□□□ -0.01
SUDS3-204ENST00000543473 PRB1P04280 392 aa14.98□□□□□ -0.01
SUDS3-204ENST00000543473 J3QKU1 62 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 RS1O15537 224 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 BAALC-AS2P0C853 105 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 GATA3P23771 443 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 RPL39P62891 51 aaKnown RBP14.97□□□□□ -0.01
SUDS3-204ENST00000543473 C10orf142B7Z368 130 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 ACYP1P07311 99 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 C1orf229Q6ZS94 237 aaPredicted RBP14.97□□□□□ -0.01
SUDS3-204ENST00000543473 C11orf86A6NJI1 115 aa14.97□□□□□ -0.01
SUDS3-204ENST00000543473 TCTEX1D4Q5JR98 221 aa14.96□□□□□ -0.01
SUDS3-204ENST00000543473 Q8NA96 180 aa14.96□□□□□ -0.01
SUDS3-204ENST00000543473 Q9H8V8 135 aa14.96□□□□□ -0.01
SUDS3-204ENST00000543473 NSUN5P1Q3KNT7 163 aa14.96□□□□□ -0.01
SUDS3-204ENST00000543473 NCKAP5O14513 1909 aa14.96□□□□□ -0.01
SUDS3-204ENST00000543473 LINC00310P59036 64 aa14.95□□□□□ -0.02
SUDS3-204ENST00000543473 Q96MF0 132 aa14.95□□□□□ -0.02
SUDS3-204ENST00000543473 ADORA2A-AS1P86434 159 aa14.95□□□□□ -0.02
SUDS3-204ENST00000543473 TMEM243Q9BU79 118 aa14.95□□□□□ -0.02
SUDS3-204ENST00000543473 CEP295Q9C0D2 2601 aa14.95□□□□□ -0.02
SUDS3-204ENST00000543473 ICOSQ9Y6W8 199 aa14.95□□□□□ -0.02
SUDS3-204ENST00000543473 TINCRA0A1B0GVN0 87 aa14.94□□□□□ -0.02
SUDS3-204ENST00000543473 TM2D2Q9BX73 214 aa14.94□□□□□ -0.02
SUDS3-204ENST00000543473 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.93□□□□□ -0.02
SUDS3-204ENST00000543473 IGKV2-29A2NJV5 120 aaPredicted RBP14.93□□□□□ -0.02
SUDS3-204ENST00000543473 DEFB130BP0DP73 79 aa14.93□□□□□ -0.02
SUDS3-204ENST00000543473 DEFB130AP0DP74 79 aa14.93□□□□□ -0.02
SUDS3-204ENST00000543473 ZNF80P51504 273 aaPredicted RBP14.93□□□□□ -0.02
SUDS3-204ENST00000543473 SPANXB1Q9NS25 103 aaPredicted RBP14.93□□□□□ -0.02
SUDS3-204ENST00000543473 HOXB4P17483 251 aaPredicted RBP14.93□□□□□ -0.02
SUDS3-204ENST00000543473 TMEM126AQ9H061 195 aa14.93□□□□□ -0.02
SUDS3-204ENST00000543473 HAMPP81172 84 aa14.93□□□□□ -0.02
SUDS3-204ENST00000543473 C9orf47Q6ZRZ4 202 aa14.93□□□□□ -0.02
SUDS3-204ENST00000543473 CCDC168Q8NDH2 2452 aa14.92□□□□□ -0.02
SUDS3-204ENST00000543473 NXPH4O95158 308 aa14.92□□□□□ -0.02
SUDS3-204ENST00000543473 CENPVL3A0A0U1RRI6 287 aa14.92□□□□□ -0.02
SUDS3-204ENST00000543473 CFHR3Q02985 330 aa14.92□□□□□ -0.02
SUDS3-204ENST00000543473 TIMM17AQ99595 171 aa14.92□□□□□ -0.02
SUDS3-204ENST00000543473 NDUFA11Q86Y39 141 aa14.92□□□□□ -0.02
SUDS3-204ENST00000543473 Q6ZUT4 128 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 PIFOQ8TCI5 191 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 CEP192Q8TEP8 1941 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 DNAH12Q6ZR08 3092 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 FAM236AA0A1B0GUQ0 79 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 FAM236BA0A1B0GV22 79 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 C16orf54Q6UWD8 224 aa14.91□□□□□ -0.02
SUDS3-204ENST00000543473 DPH3Q96FX2 82 aa14.9□□□□□ -0.02
SUDS3-204ENST00000543473 IGKV2D-26A0A0A0MRZ7 120 aa14.9□□□□□ -0.02
SUDS3-204ENST00000543473 TRBV10-2A0A0K0K1G8 114 aa14.9□□□□□ -0.02
SUDS3-204ENST00000543473 FANCD2OSQ96PS1 177 aa14.9□□□□□ -0.02
SUDS3-204ENST00000543473 LINC00574Q9H8X3 128 aa14.9□□□□□ -0.02
SUDS3-204ENST00000543473 NACAE9PAV3 2078 aa14.9□□□□□ -0.02
SUDS3-204ENST00000543473 H3BUA1 57 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 C2orf91Q6ZV80 131 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 Q8N9W7 124 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 RNF183Q96D59 192 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 IGLC6P0CF74 106 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 SONP18583 2426 aaKnown RBP14.89□□□□□ -0.03
SUDS3-204ENST00000543473 TCL1BO95988 128 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 MT-ATP8P03928 68 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 SPANXCQ9NY87 97 aa14.89□□□□□ -0.03
SUDS3-204ENST00000543473 Q8N7P7 452 aa14.88□□□□□ -0.03
SUDS3-204ENST00000543473 WNK1Q9H4A3 2382 aa14.88□□□□□ -0.03
SUDS3-204ENST00000543473 Q8N976 141 aa14.87□□□□□ -0.03
SUDS3-204ENST00000543473 CEP350Q5VT06 3117 aa14.87□□□□□ -0.03
SUDS3-204ENST00000543473 MYCNOSP40205 109 aa14.87□□□□□ -0.03
SUDS3-204ENST00000543473 DAZAP2Q15038 168 aaPredicted RBP14.87□□□□□ -0.03
SUDS3-204ENST00000543473 H3BT86 120 aa14.87□□□□□ -0.03
SUDS3-204ENST00000543473 LINC01619G3V211 115 aa14.86□□□□□ -0.03
SUDS3-204ENST00000543473 CRLF1O75462 422 aa14.86□□□□□ -0.03
SUDS3-204ENST00000543473 C3orf56Q8N813 242 aa14.85□□□□□ -0.03
SUDS3-204ENST00000543473 DEFB1P60022 68 aa14.85□□□□□ -0.03
SUDS3-204ENST00000543473 DAND5Q8N907 189 aa14.85□□□□□ -0.03
SUDS3-204ENST00000543473 NAV2Q8IVL1 2488 aa14.85□□□□□ -0.03
SUDS3-204ENST00000543473 CRIP1P50238 77 aa14.84□□□□□ -0.03
SUDS3-204ENST00000543473 MED14OSP0DP75 135 aa14.84□□□□□ -0.03
SUDS3-204ENST00000543473 RPL32P62910 135 aaKnown RBP14.84□□□□□ -0.03
SUDS3-204ENST00000543473 MAPKAPK5-AS1Q8N8E1 139 aa14.84□□□□□ -0.03
SUDS3-204ENST00000543473 A0A0B4J2C4 111 aa14.83□□□□□ -0.03
SUDS3-204ENST00000543473 HERV-K104P63124 156 aa14.83□□□□□ -0.03
SUDS3-204ENST00000543473 IGHV4-61A0A0C4DH41 118 aa14.83□□□□□ -0.04
SUDS3-204ENST00000543473 SLC25A29Q8N8R3 303 aa14.83□□□□□ -0.04
SUDS3-204ENST00000543473 CLEC2BQ92478 149 aa14.83□□□□□ -0.04
SUDS3-204ENST00000543473 C2CD3Q4AC94 2353 aa14.83□□□□□ -0.04
SUDS3-204ENST00000543473 AJUBAQ96IF1 538 aa14.83□□□□□ -0.04
SUDS3-204ENST00000543473 RBMY1FQ15415 496 aaKnown RBP14.82□□□□□ -0.04
SUDS3-204ENST00000543473 U3KQE9 123 aa14.82□□□□□ -0.04
SUDS3-204ENST00000543473 LGALS9O00182 355 aa14.82□□□□□ -0.04
SUDS3-204ENST00000543473 MYO18BQ8IUG5 2567 aa14.82□□□□□ -0.04
SUDS3-204ENST00000543473 HOXD3P31249 432 aaPredicted RBP14.82□□□□□ -0.04
SUDS3-204ENST00000543473 Q8N1Y9 231 aa14.81□□□□□ -0.04
SUDS3-204ENST00000543473 J3QLI3 93 aa14.81□□□□□ -0.04
SUDS3-204ENST00000543473 ATOX1O00244 68 aa14.81□□□□□ -0.04
SUDS3-204ENST00000543473 HCFC1P51610 2035 aa14.8□□□□□ -0.04
SUDS3-204ENST00000543473 FBXL19-AS1Q494R0 122 aa14.8□□□□□ -0.04
SUDS3-204ENST00000543473 OPRPNQ99935 248 aaPredicted RBP14.8□□□□□ -0.04
SUDS3-204ENST00000543473 NRGNQ92686 78 aa14.8□□□□□ -0.04
SUDS3-204ENST00000543473 ORMDL1Q9P0S3 153 aa14.8□□□□□ -0.04
SUDS3-204ENST00000543473 IGHV4-30-2A0A087WSY4 118 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms