RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SMIM17P0DL12 118 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 HBBP68871 147 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 RASL11AQ6T310 242 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 ZNF705AQ6ZN79 300 aaPredicted RBP4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 ZNF575Q86XF7 245 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 Q8N1X5 172 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 C16orf74Q96GX8 76 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 YPEL4Q96NS1 127 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 SPXQ9BT56 116 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 TRAPPC1Q9Y5R8 145 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 AGRNO00468 2067 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 M0R2P5 195 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 APCSP02743 223 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 MT-ND6P03923 174 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 SLPIP03973 132 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 TRGC1P0CF51 173 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 RNF183Q96D59 192 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 C9orf85Q96MD7 179 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 GNB1LQ9BYB4 327 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 NOP10Q9NPE3 64 aaKnown RBP4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 SCRT2Q9NQ03 307 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
CLTCL1-206ENST00000540896 PRKDCP78527 4128 aaKnown RBP4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 A0A1B0GXF2 115 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 C1orf196B1AJZ1 125 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 F5H697 171 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 HLA-DQA1P01909 254 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 TRGC2P03986 189 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 MIFP14174 115 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 EVI2AP22794 236 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 TMEM136Q6ZRR5 245 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 C14orf178Q8N769 122 aaPredicted RBP4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 C11orf72Q8NBR9 251 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 RNASE8Q8TDE3 154 aaKnown RBP4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 AP1S3Q96PC3 154 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 CNFNQ9BYD5 112 aa4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 MRPL16Q9NX20 251 aaKnown RBP4.78□□□□□ -1.64
CLTCL1-206ENST00000540896 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 IGHV4-4A0A075B6R2 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 IGHV4-28A0A0C4DH34 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 GAGE12BA1L429 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 DEFB4AO15263 64 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 GAGE7O76087 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 MGPP08493 103 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 GAGE12FP0CL80 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 GAGE12GP0CL81 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 GAGE12IP0CL82 117 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 RAB5BP61020 215 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 DAZ2Q13117 558 aaKnown RBP4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 FAM74A4Q5TZK3 123 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 FAM104BQ5XKR9 115 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 TMEM191AQ9H0A3 160 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 RETNQ9HD89 108 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 TP53TG1Q9Y2A0 90 aa4.77□□□□□ -1.65
CLTCL1-206ENST00000540896 A0A087WWL8 130 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 A8MWV9 139 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 NXPH4O95158 308 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 DEFB130BP0DP73 79 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 DEFB130AP0DP74 79 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 CKS2P33552 79 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 SLAQ13239 276 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 LGALS9BQ3B8N2 356 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 KIAA1644Q3SXP7 199 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 Q6ZTI0 123 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 SBSPONQ8IVN8 264 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 AMN1Q8IY45 258 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 OR4C5Q8NGB2 326 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 RASL10AQ92737 203 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 PTH2Q96A98 100 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 WWC2-AS2Q96NR7 200 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 OVOL2Q9BRP0 275 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 DPH3P1Q9H4G8 78 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 JPT2Q9H910 190 aa4.76□□□□□ -1.65
CLTCL1-206ENST00000540896 IGHV3-73A0A0B4J1V6 119 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 IGHV3-53P01767 116 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 SPART-AS1P0CW21 52 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 RAB4AP20338 218 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 ZNF56Q15929 161 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 MRPL51Q4U2R6 128 aaKnown RBP4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 PIK3CD-AS1Q5SR53 167 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 FAM222AQ5U5X8 452 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 CFAP126Q5VTH2 177 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 Q8NAQ8 132 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 GATD1Q8NB37 220 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 B9D2Q9BPU9 175 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 NDUFAF3Q9BU61 184 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 SAMD10Q9BYL1 202 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
CLTCL1-206ENST00000540896 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 LYRM9A8MSI8 78 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 D6R8Y8 96 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 SMKR1H3BMG3 65 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 RHODO00212 210 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 RS1O15537 224 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 NCR2O95944 276 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 PPBPP02775 128 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms