RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ARL2-SNX15V9GYD0 113 aa12.87□□□□□ -0.35
LPCAT3-210ENST00000540090 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
LPCAT3-210ENST00000540090 B4DEV8 164 aa12.86□□□□□ -0.35
LPCAT3-210ENST00000540090 OR11H4Q8NGC9 324 aa12.86□□□□□ -0.35
LPCAT3-210ENST00000540090 SFRP2Q96HF1 295 aa12.86□□□□□ -0.35
LPCAT3-210ENST00000540090 MARVELD1Q9BSK0 173 aa12.86□□□□□ -0.35
LPCAT3-210ENST00000540090 A0A087WWL8 130 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 KRBOX1C9JBD0 128 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 TMEM262E9PQX1 116 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 SSNA1O43805 119 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 CXorf1O96002 111 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 CRIP1P50238 77 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 UBE2D3P61077 147 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 UBE2D2P62837 147 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 DGAT2L7PQ6IED9 249 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 S100ZQ8WXG8 99 aa12.85□□□□□ -0.35
LPCAT3-210ENST00000540090 TRBV7-3A0A075B6L6 115 aa12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 A0A1W2PRE2 83 aa12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 USP17L23D6RBM5 183 aa12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 C9orf163Q8N9P6 203 aa12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
LPCAT3-210ENST00000540090 LRP2P98164 4655 aa12.83□□□□□ -0.35
LPCAT3-210ENST00000540090 UPK1BO75841 260 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 MBP02144 154 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 PRSS1P07477 247 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 IFITM3Q01628 133 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 HSD17B11Q8NBQ5 300 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 PHLDA3Q9Y5J5 127 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 TNXBP22105 4242 aa12.83□□□□□ -0.36
LPCAT3-210ENST00000540090 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 CRPP02741 224 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 ATP6V0CP27449 155 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 SERF2P84101 59 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 Q6ZRU5 148 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 C15orf54Q8N8G6 183 aa12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.82□□□□□ -0.36
LPCAT3-210ENST00000540090 M0R036 132 aa12.81□□□□□ -0.36
LPCAT3-210ENST00000540090 COX8CQ7Z4L0 72 aa12.81□□□□□ -0.36
LPCAT3-210ENST00000540090 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
LPCAT3-210ENST00000540090 ACTR3CQ9C0K3 210 aaPredicted RBP12.81□□□□□ -0.36
LPCAT3-210ENST00000540090 IFNA7P01567 189 aa12.8□□□□□ -0.36
LPCAT3-210ENST00000540090 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
LPCAT3-210ENST00000540090 Q86TA4 180 aa12.8□□□□□ -0.36
LPCAT3-210ENST00000540090 ZC2HC1AQ96GY0 325 aa12.8□□□□□ -0.36
LPCAT3-210ENST00000540090 TNFSF18Q9UNG2 199 aa12.8□□□□□ -0.36
LPCAT3-210ENST00000540090 PANO1I0J062 215 aa12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 M0R381 172 aa12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 SH2D1AO60880 128 aa12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 HLA-DQA1P01909 254 aa12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 ANGP03950 147 aaKnown RBP12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 TPT1P13693 172 aaKnown RBP12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 MIAQ16674 131 aa12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 SDIM1Q6ZPB5 146 aa12.79□□□□□ -0.36
LPCAT3-210ENST00000540090 PEX7O00628 323 aa12.78□□□□□ -0.36
LPCAT3-210ENST00000540090 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
LPCAT3-210ENST00000540090 ZFP30Q9Y2G7 519 aa12.78□□□□□ -0.36
LPCAT3-210ENST00000540090 RPL19P84098 196 aaKnown RBP12.77□□□□□ -0.37
LPCAT3-210ENST00000540090 FAM162BQ5T6X4 162 aa12.77□□□□□ -0.37
LPCAT3-210ENST00000540090 HIST1H2BAQ96A08 127 aa12.77□□□□□ -0.37
LPCAT3-210ENST00000540090 A0A0D9SG52 128 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 PKIAP61925 76 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 ZNF674Q2M3X9 581 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 KRTAP26-1Q6PEX3 210 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 PRR34Q9NV39 138 aa12.76□□□□□ -0.37
LPCAT3-210ENST00000540090 RNF213Q63HN8 5207 aa12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 UBE2G2P60604 165 aa12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 RAB4BP61018 213 aa12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 PRR27Q6MZM9 219 aa12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 AQP10Q96PS8 301 aa12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 CHCHD5Q9BSY4 110 aa12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
LPCAT3-210ENST00000540090 TMSB15BA0A087X1C1 80 aa12.74□□□□□ -0.37
LPCAT3-210ENST00000540090 PTTG1O95997 202 aa12.74□□□□□ -0.37
LPCAT3-210ENST00000540090 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
LPCAT3-210ENST00000540090 ZNF726P1Q15940 193 aa12.74□□□□□ -0.37
LPCAT3-210ENST00000540090 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
LPCAT3-210ENST00000540090 CLRN3Q8NCR9 226 aa12.73□□□□□ -0.37
LPCAT3-210ENST00000540090 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
LPCAT3-210ENST00000540090 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
LPCAT3-210ENST00000540090 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
LPCAT3-210ENST00000540090 RBX1P62877 108 aa12.71□□□□□ -0.37
LPCAT3-210ENST00000540090 FMC1Q96HJ9 113 aa12.71□□□□□ -0.37
LPCAT3-210ENST00000540090 TRBV6-1A0A0K0K1D8 114 aa12.7□□□□□ -0.38
LPCAT3-210ENST00000540090 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
LPCAT3-210ENST00000540090 TMEM97Q5BJF2 176 aa12.7□□□□□ -0.38
LPCAT3-210ENST00000540090 LINC00269Q8N2A0 174 aa12.7□□□□□ -0.38
LPCAT3-210ENST00000540090 LTAP01374 205 aa12.69□□□□□ -0.38
LPCAT3-210ENST00000540090 UBE2G1P62253 170 aa12.69□□□□□ -0.38
LPCAT3-210ENST00000540090 ZNF56Q15929 161 aa12.69□□□□□ -0.38
LPCAT3-210ENST00000540090 CLPSL2Q6UWE3 100 aa12.69□□□□□ -0.38
LPCAT3-210ENST00000540090 VAX2Q9UIW0 290 aa12.69□□□□□ -0.38
LPCAT3-210ENST00000540090 DEFA1P59665 94 aa12.67□□□□□ -0.38
LPCAT3-210ENST00000540090 DEFA3P59666 94 aa12.67□□□□□ -0.38
LPCAT3-210ENST00000540090 GAGE6Q13070 117 aa12.67□□□□□ -0.38
LPCAT3-210ENST00000540090 OR10AG1Q8NH19 301 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms