RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TTC32Q5I0X7 151 aa12.48□□□□□ -0.41
SNRPA1-203ENST00000540017 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
SNRPA1-203ENST00000540017 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
SNRPA1-203ENST00000540017 OCC1Q8TAD7 63 aa12.48□□□□□ -0.41
SNRPA1-203ENST00000540017 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-203ENST00000540017 TMEM250H0YL14 139 aa12.47□□□□□ -0.41
SNRPA1-203ENST00000540017 RHODO00212 210 aa12.47□□□□□ -0.41
SNRPA1-203ENST00000540017 SOHLH1Q5JUK2 328 aa12.47□□□□□ -0.41
SNRPA1-203ENST00000540017 PKD1P98161 4303 aa12.47□□□□□ -0.41
SNRPA1-203ENST00000540017 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 GAGE12JA6NER3 117 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 IGLC6P0CF74 106 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 LINC00694P0DN24 101 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 TIRAPP58753 221 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 SSTP61278 116 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 GAGE1Q13065 139 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 GAGE4Q13068 117 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 GAGE5Q13069 117 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 TEX261Q6UWH6 196 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 NUDT10Q8NFP7 164 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 NUDT11Q96G61 164 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 FAM210AQ96ND0 272 aa12.46□□□□□ -0.41
SNRPA1-203ENST00000540017 P01737 135 aa12.45□□□□□ -0.42
SNRPA1-203ENST00000540017 TNP2Q05952 138 aa12.45□□□□□ -0.42
SNRPA1-203ENST00000540017 EIF5A2Q9GZV4 153 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-203ENST00000540017 CEBPGP53567 150 aa12.44□□□□□ -0.42
SNRPA1-203ENST00000540017 RPS20P60866 119 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-203ENST00000540017 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
SNRPA1-203ENST00000540017 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
SNRPA1-203ENST00000540017 ATP6V0E2Q8NHE4 81 aa12.44□□□□□ -0.42
SNRPA1-203ENST00000540017 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
SNRPA1-203ENST00000540017 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
SNRPA1-203ENST00000540017 TPPP3Q9BW30 176 aa12.43□□□□□ -0.42
SNRPA1-203ENST00000540017 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-203ENST00000540017 TNFRSF18Q9Y5U5 241 aa12.43□□□□□ -0.42
SNRPA1-203ENST00000540017 DNAH11Q96DT5 4516 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 SRP19P09132 144 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 LINC00315P59091 139 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 MSRB1Q9NZV6 116 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
SNRPA1-203ENST00000540017 NDUFS6O75380 124 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-203ENST00000540017 LELP1Q5T871 98 aa12.4□□□□□ -0.42
SNRPA1-203ENST00000540017 LYZL1Q6UWQ5 148 aa12.4□□□□□ -0.42
SNRPA1-203ENST00000540017 Q6ZRN7 208 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-203ENST00000540017 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-203ENST00000540017 DYNC1H1Q14204 4646 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-203ENST00000540017 XKRY2A2RUG3 117 aa12.39□□□□□ -0.43
SNRPA1-203ENST00000540017 RAB4BP61018 213 aa12.39□□□□□ -0.43
SNRPA1-203ENST00000540017 ZNF56Q15929 161 aa12.39□□□□□ -0.43
SNRPA1-203ENST00000540017 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
SNRPA1-203ENST00000540017 SMIM7Q9BQ49 75 aa12.39□□□□□ -0.43
SNRPA1-203ENST00000540017 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
SNRPA1-203ENST00000540017 C9JQL5 133 aa12.38□□□□□ -0.43
SNRPA1-203ENST00000540017 SRSF3P84103 164 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-203ENST00000540017 TRAV8-6A0A0B4J262 113 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 F2Z2F3 143 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 EVI2AP22794 236 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 CACNG7P62955 275 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 Q8N3U1 123 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
SNRPA1-203ENST00000540017 TRAV9-2A0A087WT02 112 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 ZNF727A8MUV8 499 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 F5H697 171 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 NTF3P20783 257 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 CTRLP40313 264 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 LINC01556Q5JQF7 62 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 LINC01551Q86U37 167 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 NEXN-AS1Q8NBZ9 246 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 GTSF1Q8WW33 167 aa12.36□□□□□ -0.43
SNRPA1-203ENST00000540017 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-203ENST00000540017 UBE2D3P61077 147 aa12.35□□□□□ -0.43
SNRPA1-203ENST00000540017 UBE2D2P62837 147 aa12.35□□□□□ -0.43
SNRPA1-203ENST00000540017 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-203ENST00000540017 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
SNRPA1-203ENST00000540017 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-203ENST00000540017 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 K7EP13 123 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 IGHV3-30P01768 117 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 IGHV3-33P01772 117 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 IGHV3-30-3P0DP02 117 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 IGHV3-30-5P0DP03 117 aa12.34□□□□□ -0.43
SNRPA1-203ENST00000540017 MGPP08493 103 aa12.33□□□□□ -0.44
SNRPA1-203ENST00000540017 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
SNRPA1-203ENST00000540017 WDR73Q6P4I2 378 aa12.33□□□□□ -0.44
SNRPA1-203ENST00000540017 CNFNQ9BYD5 112 aa12.33□□□□□ -0.44
SNRPA1-203ENST00000540017 A0A087WWC5 75 aa12.32□□□□□ -0.44
SNRPA1-203ENST00000540017 M0QY20 66 aa12.31□□□□□ -0.44
SNRPA1-203ENST00000540017 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
SNRPA1-203ENST00000540017 C10orf126Q8N4M7 172 aa12.31□□□□□ -0.44
SNRPA1-203ENST00000540017 KIAA1109Q2LD37 5005 aa12.3□□□□□ -0.44
SNRPA1-203ENST00000540017 A8MWL6 223 aa12.3□□□□□ -0.44
SNRPA1-203ENST00000540017 IBA57-AS1B1ANH7 110 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms