RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 SRSF12Q8WXF0 261 aaKnown RBP4.38□□□□□ -1.71
CPSF7-219ENST00000539952 SPAG8Q99932 426 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-219ENST00000539952 CSTL1Q9H114 145 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 CLEC5AQ9NY25 188 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 HIGD1BQ9P298 99 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 RABAC1Q9UI14 185 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 APLNQ9ULZ1 77 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 HERC1Q15751 4861 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 KMT2AQ03164 3969 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 TRBV19A0A075B6N1 114 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 MUC21A0A0G2JKD1 596 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 MUC21A0A140T8X8 626 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 hDV102S1A0JD36 115 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 TMEM189A5PLL7 270 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 CBY3A6NI87 242 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 IGLL5B9A064 214 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 J3QR89 54 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 ZNF207O43670 478 aaKnown RBP4.37□□□□□ -1.71
CPSF7-219ENST00000539952 HBDP02042 147 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 SMIM13P0DJ93 91 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 APELAP0DMC3 54 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 HLA-DRB4P13762 266 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 ARL3P36405 182 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 NANOS2P60321 138 aaKnown RBP4.37□□□□□ -1.71
CPSF7-219ENST00000539952 TAL2Q16559 108 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 RNF151Q2KHN1 245 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 C15orf32Q32M92 178 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 MUC21Q5SSG8 566 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 FAM104BQ5XKR9 115 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 PRNTQ86SH4 94 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 PRELID3AQ96N28 172 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 SHANK2-AS3Q9BTD1 123 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 RPH3ALQ9UNE2 315 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 HLA-DRB4X5D2U9 266 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
CPSF7-219ENST00000539952 TRBV7-1A0A0A6YYK4 115 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 TMEM213A2RRL7 107 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 LINC01546A6NGU7 62 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 OR2T8A6NH00 312 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 E7EUB6 86 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 H3BRN7 92 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 K7EP34 96 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 ATP5LO75964 103 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 IGLV2-11P01706 119 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 CLEC3BP05452 202 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 PSG1P11464 419 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 LYZP61626 148 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 MRGPRG-AS1Q2M3A8 158 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 CLEC19AQ6UXS0 136 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 GOLT1AQ6ZVE7 132 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 FER1L6-AS1Q8NA97 138 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 EEF1AKMT3Q96AZ1 226 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 C11orf68Q9H3H3 251 aaKnown RBP4.36□□□□□ -1.71
CPSF7-219ENST00000539952 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
CPSF7-219ENST00000539952 THYN1Q9P016 225 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
CPSF7-219ENST00000539952 A0A087X0K7 114 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 NPIPB5A8MRT5 1133 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 PRSS47A8MTI9 375 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 I3L2K1 104 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 CIDEAO60543 219 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 FABP2P12104 132 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 RPL35AP18077 110 aaKnown RBP4.35□□□□□ -1.71
CPSF7-219ENST00000539952 RPL7P18124 248 aaKnown RBP4.35□□□□□ -1.71
CPSF7-219ENST00000539952 EDN2P20800 178 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 CKS2P33552 79 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 MFAP4P55083 255 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 UFSP1Q6NVU6 142 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 C2orf91Q6ZV80 131 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 ERASQ7Z444 233 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 POM121L12Q8N7R1 296 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 OR11H2Q8NH07 326 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 IFI27L1Q96BM0 104 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 ZNF414Q96IQ9 312 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
CPSF7-219ENST00000539952 CHTOPQ9Y3Y2 248 aaKnown RBP4.35□□□□□ -1.71
CPSF7-219ENST00000539952 TRAV10A0A0B4J240 114 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 TRAV8-6A0A0B4J262 113 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 RBAKDNA6NC62 111 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 LINC01549A6NIU2 74 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 FABP5P3A8MUU1 101 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 F8W1H4 67 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 P0DMU3 169 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 FAM231AP0DMU4 169 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 FAM231CP0DMU5 169 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 EVI2AP22794 236 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 FCER1GP30273 86 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 IFI27P40305 119 aaPredicted RBP4.34□□□□□ -1.71
CPSF7-219ENST00000539952 LYZL1Q6UWQ5 148 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 SIGLEC15Q6ZMC9 328 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 MTURNQ8N3F0 131 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms