RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SSTP61278 116 aa7.65□□□□□ -1.18
LEMD3-202ENST00000539442 RASL10AQ92737 203 aa7.65□□□□□ -1.18
LEMD3-202ENST00000539442 SPATA25Q9BR10 227 aa7.65□□□□□ -1.18
LEMD3-202ENST00000539442 TRAPPC1Q9Y5R8 145 aa7.65□□□□□ -1.18
LEMD3-202ENST00000539442 IGHV4-28A0A0C4DH34 117 aa7.64□□□□□ -1.19
LEMD3-202ENST00000539442 A8MWV9 139 aa7.64□□□□□ -1.19
LEMD3-202ENST00000539442 SBSPONQ8IVN8 264 aa7.64□□□□□ -1.19
LEMD3-202ENST00000539442 Q8NAQ8 132 aa7.64□□□□□ -1.19
LEMD3-202ENST00000539442 MRAPQ8TCY5 172 aa7.64□□□□□ -1.19
LEMD3-202ENST00000539442 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
LEMD3-202ENST00000539442 DPH3P1Q9H4G8 78 aa7.64□□□□□ -1.19
LEMD3-202ENST00000539442 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
LEMD3-202ENST00000539442 MRPL16Q9NX20 251 aaKnown RBP7.64□□□□□ -1.19
LEMD3-202ENST00000539442 TRGV1A0A0A0MS02 117 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 LYRM9A8MSI8 78 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 APCSP02743 223 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 TRGC2P03986 189 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 EVI2AP22794 236 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 FRZBQ92765 325 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 TM2D3Q9BRN9 247 aa7.63□□□□□ -1.19
LEMD3-202ENST00000539442 TEX48A0A1B0GUV7 120 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 RHODO00212 210 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 RS1O15537 224 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 CIDEAO60543 219 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 FABP9Q0Z7S8 132 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 SLAQ13239 276 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 AMN1Q8IY45 258 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 LINC00612Q8N6U2 182 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 C14orf178Q8N769 122 aaPredicted RBP7.62□□□□□ -1.19
LEMD3-202ENST00000539442 POM121L12Q8N7R1 296 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 C18orf15Q96N68 181 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 C11orf68Q9H3H3 251 aaKnown RBP7.62□□□□□ -1.19
LEMD3-202ENST00000539442 RETNQ9HD89 108 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 KIF25-AS1Q9Y6Z4 181 aa7.62□□□□□ -1.19
LEMD3-202ENST00000539442 MUC4Q99102 2169 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 TRAV4A0A0B4J268 109 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 C1orf196B1AJZ1 125 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 PHOX2AO14813 284 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 PPBPP02775 128 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 CRYGDP07320 174 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 RAB4AP20338 218 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 EMP1P54849 157 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 CFAP126Q5VTH2 177 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 Q6ZTI0 123 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
LEMD3-202ENST00000539442 A0A087WWL8 130 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 GAGE12BA1L429 117 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 GAGE7O76087 117 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 LINC00315P59091 139 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
LEMD3-202ENST00000539442 FAM222AQ5U5X8 452 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 MRAP2Q96G30 205 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 ZMAT4Q9H898 229 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 JPT2Q9H910 190 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 DKK2Q9UBU2 259 aa7.6□□□□□ -1.19
LEMD3-202ENST00000539442 TRGV2A0A075B6R0 118 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 MGPP08493 103 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 SPART-AS1P0CW21 52 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 RAB5BP61020 215 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 FAM74A4Q5TZK3 123 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 UFSP1Q6NVU6 142 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 ORMDL3Q8N138 153 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 OR4C5Q8NGB2 326 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 SAMD10Q9BYL1 202 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 EDA2RQ9HAV5 297 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 LAMTOR2Q9Y2Q5 125 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 U3KQK5 164 aa7.59□□□□□ -1.19
LEMD3-202ENST00000539442 D6R8Y8 96 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 DEFB4AO15263 64 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 PPP1R17O96001 155 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 CKS2P33552 79 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 DEFA6Q01524 100 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 ZNF56Q15929 161 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
LEMD3-202ENST00000539442 ALKBH7Q9BT30 221 aaPredicted RBP7.58□□□□□ -1.2
LEMD3-202ENST00000539442 F5H697 171 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 H7C1H1 209 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 DEFB130BP0DP73 79 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 DEFB130AP0DP74 79 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 SRIP30626 198 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 DAD1P61803 113 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 PRELID3AQ96N28 172 aa7.57□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 IGHV3-53P01767 116 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 NHLRC4P0CG21 123 aaPredicted RBP7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
LEMD3-202ENST00000539442 SUMO4Q6EEV6 95 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms