RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
GNE-204ENST00000539208 CBY3A6NI87 242 aa13.26□□□□□ -0.29
GNE-204ENST00000539208 ERASQ7Z444 233 aa13.26□□□□□ -0.29
GNE-204ENST00000539208 A0A087WWL8 130 aa13.25□□□□□ -0.29
GNE-204ENST00000539208 VCYO14598 125 aa13.25□□□□□ -0.29
GNE-204ENST00000539208 TRGV11A0A075B6L2 103 aa13.25□□□□□ -0.29
GNE-204ENST00000539208 A6NDN8 102 aa13.25□□□□□ -0.29
GNE-204ENST00000539208 TEX15Q9BXT5 2789 aa13.25□□□□□ -0.29
GNE-204ENST00000539208 CHTOPQ9Y3Y2 248 aaKnown RBP13.24□□□□□ -0.29
GNE-204ENST00000539208 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
GNE-204ENST00000539208 DOPEY2Q9Y3R5 2298 aa13.24□□□□□ -0.29
GNE-204ENST00000539208 F5H697 171 aa13.24□□□□□ -0.29
GNE-204ENST00000539208 CRYGDP07320 174 aa13.24□□□□□ -0.29
GNE-204ENST00000539208 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
GNE-204ENST00000539208 VAMP3Q15836 100 aa13.23□□□□□ -0.29
GNE-204ENST00000539208 BAALCQ8WXS3 180 aa13.23□□□□□ -0.29
GNE-204ENST00000539208 CYSLTR1Q9Y271 337 aa13.23□□□□□ -0.29
GNE-204ENST00000539208 TRBV27A0A0K0K1C4 114 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 DEFB131AP59861 70 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 WFDC11Q8NEX6 87 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 H3BMM0 161 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 ZFP2Q6ZN57 461 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 Q6ZSV7 163 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
GNE-204ENST00000539208 APCP25054 2843 aa13.22□□□□□ -0.29
GNE-204ENST00000539208 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
GNE-204ENST00000539208 H3BRM9 83 aa13.21□□□□□ -0.29
GNE-204ENST00000539208 M0QY20 66 aa13.21□□□□□ -0.29
GNE-204ENST00000539208 TRBV25-1A0A075B6N4 114 aa13.21□□□□□ -0.3
GNE-204ENST00000539208 SDHAF1A6NFY7 115 aa13.21□□□□□ -0.3
GNE-204ENST00000539208 NEGR1Q7Z3B1 354 aa13.21□□□□□ -0.3
GNE-204ENST00000539208 TMEM61Q8N0U2 210 aa13.21□□□□□ -0.3
GNE-204ENST00000539208 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.3
GNE-204ENST00000539208 RIPPLY3P57055 190 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 FAM74A4Q5TZK3 123 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 TTTY13Q9BZ97 58 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 EPG5Q9HCE0 2579 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 PRSS29PA6NIE9 313 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 ZNF876PQ49A33 203 aa13.2□□□□□ -0.3
GNE-204ENST00000539208 AGRNO00468 2067 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 DNAJC9-AS1A6NH13 148 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 IGIPA6NJ69 53 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
GNE-204ENST00000539208 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
GNE-204ENST00000539208 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
GNE-204ENST00000539208 TMEM141Q96I45 108 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 CHAC1Q9BUX1 264 aa13.19□□□□□ -0.3
GNE-204ENST00000539208 ZNF56Q15929 161 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 MORN3Q6PF18 240 aaPredicted RBP13.18□□□□□ -0.3
GNE-204ENST00000539208 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 TP53TG1Q9Y2A0 90 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 TIMM17AQ99595 171 aa13.18□□□□□ -0.3
GNE-204ENST00000539208 SPAG8Q99932 426 aaPredicted RBP13.18□□□□□ -0.3
GNE-204ENST00000539208 AMMECR1LQ6DCA0 310 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 EDA2RQ9HAV5 297 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
GNE-204ENST00000539208 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
GNE-204ENST00000539208 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 TSHBP01222 138 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
GNE-204ENST00000539208 PIK3CD-AS1Q5SR53 167 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
GNE-204ENST00000539208 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
GNE-204ENST00000539208 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
GNE-204ENST00000539208 RHOHQ15669 191 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 TAL2Q16559 108 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 PAPPA-AS1Q5QFB9 102 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 PTH2Q96A98 100 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 TM2D2Q9BX73 214 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 PMVKQ15126 192 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 NSUN5P1Q3KNT7 163 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.3
GNE-204ENST00000539208 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
GNE-204ENST00000539208 E9PLD3 99 aa13.14□□□□□ -0.31
GNE-204ENST00000539208 OR11H2Q8NH07 326 aa13.14□□□□□ -0.31
GNE-204ENST00000539208 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
GNE-204ENST00000539208 FHL3Q13643 280 aa13.14□□□□□ -0.31
GNE-204ENST00000539208 RAX2Q96IS3 184 aa13.14□□□□□ -0.31
GNE-204ENST00000539208 ITPR3Q14573 2671 aa13.13□□□□□ -0.31
GNE-204ENST00000539208 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
GNE-204ENST00000539208 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
GNE-204ENST00000539208 CST9LQ9H4G1 147 aa13.13□□□□□ -0.31
GNE-204ENST00000539208 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
GNE-204ENST00000539208 GCSHP23434 173 aa13.13□□□□□ -0.31
GNE-204ENST00000539208 CEND1Q8N111 149 aa13.13□□□□□ -0.31
GNE-204ENST00000539208 MYMXA0A1B0GTQ4 84 aa13.12□□□□□ -0.31
GNE-204ENST00000539208 I3L3M4 83 aa13.12□□□□□ -0.31
GNE-204ENST00000539208 K7EP13 123 aa13.12□□□□□ -0.31
GNE-204ENST00000539208 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
GNE-204ENST00000539208 FXYD2P54710 66 aa13.12□□□□□ -0.31
GNE-204ENST00000539208 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms