RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 S100A9P06702 114 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 ARMS2P0C7Q2 107 aa8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 Q0VG73 95 aa8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 DMRTA1Q5VZB9 504 aa8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 LINC00479Q96M42 142 aa8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 CHCHD7Q9BUK0 85 aa8.85□□□□□ -0.99
CLSTN3-205ENST00000535452 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
CLSTN3-205ENST00000535452 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
CLSTN3-205ENST00000535452 FAM74A7A6NL05 159 aa8.84□□□□□ -0.99
CLSTN3-205ENST00000535452 SMIM17P0DL12 118 aa8.84□□□□□ -0.99
CLSTN3-205ENST00000535452 GRIFINA4D1Z8 144 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 KRBOX1C9JBD0 128 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 ARPC5O15511 151 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 SH2D1AO60880 128 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 ZNF56Q15929 161 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
CLSTN3-205ENST00000535452 UBE2WQ96B02 151 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
CLSTN3-205ENST00000535452 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
CLSTN3-205ENST00000535452 APOBP04114 4563 aaKnown RBP8.82□□□□□ -1
CLSTN3-205ENST00000535452 A0A087WWL8 130 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 LECT2O14960 151 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 FHITP49789 147 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
CLSTN3-205ENST00000535452 HAMPP81172 84 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 TMEM97Q5BJF2 176 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 DNLZQ5SXM8 178 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 SFRP2Q96HF1 295 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 KLK12Q9UKR0 248 aa8.82□□□□□ -1
CLSTN3-205ENST00000535452 TRBV7-3A0A075B6L6 115 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 F5H697 171 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 LINC01559Q495D7 138 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 SPANXN1Q5VSR9 72 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
CLSTN3-205ENST00000535452 BAALCQ8WXS3 180 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 ZC2HC1AQ96GY0 325 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 ZNF471Q9BX82 626 aaPredicted RBP8.81□□□□□ -1
CLSTN3-205ENST00000535452 SAMD10Q9BYL1 202 aa8.81□□□□□ -1
CLSTN3-205ENST00000535452 RNF222A6NCQ9 220 aa8.8□□□□□ -1
CLSTN3-205ENST00000535452 UMAD1C9J7I0 102 aa8.8□□□□□ -1
CLSTN3-205ENST00000535452 RGS21Q2M5E4 152 aa8.8□□□□□ -1
CLSTN3-205ENST00000535452 NIT1Q86X76 327 aa8.8□□□□□ -1
CLSTN3-205ENST00000535452 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 KANTRA0A1W2PQU2 76 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 TEX46H3BTG2 121 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 RAB4BP61018 213 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 ZNF726P1Q15940 193 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 SFT2D1Q8WV19 159 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 JPT2Q9H910 190 aa8.79□□□□□ -1
CLSTN3-205ENST00000535452 LTAP01374 205 aa8.78□□□□□ -1
CLSTN3-205ENST00000535452 ANGP03950 147 aaKnown RBP8.78□□□□□ -1
CLSTN3-205ENST00000535452 LINC00694P0DN24 101 aa8.78□□□□□ -1
CLSTN3-205ENST00000535452 Q5BKY6 102 aa8.78□□□□□ -1
CLSTN3-205ENST00000535452 DAZAP1Q96EP5 407 aaKnown RBP8.78□□□□□ -1
CLSTN3-205ENST00000535452 H7C1H1 209 aa8.77□□□□□ -1.01
CLSTN3-205ENST00000535452 PAGE4O60829 102 aa8.77□□□□□ -1.01
CLSTN3-205ENST00000535452 PRR27Q6MZM9 219 aa8.77□□□□□ -1.01
CLSTN3-205ENST00000535452 COX8CQ7Z4L0 72 aa8.77□□□□□ -1.01
CLSTN3-205ENST00000535452 BAGE2Q86Y30 109 aa8.77□□□□□ -1.01
CLSTN3-205ENST00000535452 FAM213BQ8TBF2 198 aa8.77□□□□□ -1.01
CLSTN3-205ENST00000535452 TRBV6-8A0A0A6YYG3 113 aa8.76□□□□□ -1.01
CLSTN3-205ENST00000535452 CRIP1P50238 77 aa8.76□□□□□ -1.01
CLSTN3-205ENST00000535452 UFSP1Q6NVU6 142 aa8.76□□□□□ -1.01
CLSTN3-205ENST00000535452 Q8N3U1 123 aa8.76□□□□□ -1.01
CLSTN3-205ENST00000535452 C15orf54Q8N8G6 183 aa8.76□□□□□ -1.01
CLSTN3-205ENST00000535452 AP1S3Q96PC3 154 aa8.76□□□□□ -1.01
CLSTN3-205ENST00000535452 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 A0A1B0GV50 99 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 HLA-DQA1P01909 254 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 CXCL1P09341 107 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 H2AFB1P0C5Y9 115 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 UBE2D3P61077 147 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 UBE2D2P62837 147 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 KCNRGQ8N5I3 272 aa8.75□□□□□ -1.01
CLSTN3-205ENST00000535452 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 A0A0D9SG52 128 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 SSTP61278 116 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 ZNF345Q14585 488 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 MIAQ16674 131 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 EIF5AL1Q6IS14 154 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 OR10G8Q8NGN5 311 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 TPPP3Q9BW30 176 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
CLSTN3-205ENST00000535452 RPS20P60866 119 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-205ENST00000535452 WFDC2Q14508 124 aa8.73□□□□□ -1.01
CLSTN3-205ENST00000535452 MANBALQ9NQG1 85 aa8.73□□□□□ -1.01
CLSTN3-205ENST00000535452 BIN3Q9NQY0 253 aa8.73□□□□□ -1.01
CLSTN3-205ENST00000535452 MGPP08493 103 aa8.72□□□□□ -1.01
CLSTN3-205ENST00000535452 OR5AL1P0C617 328 aa8.72□□□□□ -1.01
CLSTN3-205ENST00000535452 Q6ZSA8 131 aa8.72□□□□□ -1.01
CLSTN3-205ENST00000535452 SCXQ7RTU7 201 aa8.72□□□□□ -1.01
CLSTN3-205ENST00000535452 DERL1Q9BUN8 251 aa8.72□□□□□ -1.01
CLSTN3-205ENST00000535452 CHAC1Q9BUX1 264 aa8.72□□□□□ -1.01
CLSTN3-205ENST00000535452 SCO2A0A1W2PP80 73 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms