RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SMIM7Q9BQ49 75 aa15.63■□□□□ 0.09
SFSWAP-204ENST00000535399 Q9H8V8 135 aa15.63■□□□□ 0.09
SFSWAP-204ENST00000535399 LY96Q9Y6Y9 160 aa15.63■□□□□ 0.09
SFSWAP-204ENST00000535399 XKRY2A2RUG3 117 aa15.62■□□□□ 0.09
SFSWAP-204ENST00000535399 SRSF3P84103 164 aaKnown RBP15.62■□□□□ 0.09
SFSWAP-204ENST00000535399 ZNF727A8MUV8 499 aa15.61■□□□□ 0.09
SFSWAP-204ENST00000535399 FAM74A4Q5TZK3 123 aa15.61■□□□□ 0.09
SFSWAP-204ENST00000535399 SPANXN1Q5VSR9 72 aa15.61■□□□□ 0.09
SFSWAP-204ENST00000535399 C14orf178Q8N769 122 aaPredicted RBP15.61■□□□□ 0.09
SFSWAP-204ENST00000535399 RPP21Q9H633 154 aaKnown RBP15.61■□□□□ 0.09
SFSWAP-204ENST00000535399 PEA15Q15121 130 aa15.6■□□□□ 0.09
SFSWAP-204ENST00000535399 SH2D6Q7Z4S9 175 aa15.6■□□□□ 0.09
SFSWAP-204ENST00000535399 TPPP3Q9BW30 176 aa15.6■□□□□ 0.09
SFSWAP-204ENST00000535399 NBDYA0A0U1RRE5 68 aa15.59■□□□□ 0.09
SFSWAP-204ENST00000535399 LINC01551Q86U37 167 aa15.59■□□□□ 0.09
SFSWAP-204ENST00000535399 Q9UF83 564 aa15.59■□□□□ 0.09
SFSWAP-204ENST00000535399 EPPK1P58107 5090 aaKnown RBP15.58■□□□□ 0.09
SFSWAP-204ENST00000535399 SSTP61278 116 aa15.58■□□□□ 0.08
SFSWAP-204ENST00000535399 FAM231DQ6ZW35 169 aa15.58■□□□□ 0.08
SFSWAP-204ENST00000535399 SMDT1Q9H4I9 107 aa15.58■□□□□ 0.08
SFSWAP-204ENST00000535399 FRAS1Q86XX4 4008 aa15.57■□□□□ 0.08
SFSWAP-204ENST00000535399 A0A1W2PPQ1 181 aa15.57■□□□□ 0.08
SFSWAP-204ENST00000535399 F2Z2F3 143 aa15.57■□□□□ 0.08
SFSWAP-204ENST00000535399 LINC00694P0DN24 101 aa15.57■□□□□ 0.08
SFSWAP-204ENST00000535399 TIRAPP58753 221 aa15.57■□□□□ 0.08
SFSWAP-204ENST00000535399 CACNG7P62955 275 aa15.56■□□□□ 0.08
SFSWAP-204ENST00000535399 FAM74A3Q4VXF1 159 aa15.56■□□□□ 0.08
SFSWAP-204ENST00000535399 LYZL1Q6UWQ5 148 aa15.56■□□□□ 0.08
SFSWAP-204ENST00000535399 DNAH17Q9UFH2 4485 aa15.56■□□□□ 0.08
SFSWAP-204ENST00000535399 GAGE12JA6NER3 117 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 GATCO43716 136 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 CTRLP40313 264 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 GAGE1Q13065 139 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 GAGE4Q13068 117 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 GAGE5Q13069 117 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 GAGE13Q4V321 117 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 KRTAP1-5Q9BYS1 174 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 MSRB1Q9NZV6 116 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 KIF25-AS1Q9Y6Z4 181 aa15.55■□□□□ 0.08
SFSWAP-204ENST00000535399 RTL8CO15255 209 aa15.54■□□□□ 0.08
SFSWAP-204ENST00000535399 ERVFC1-1P60608 527 aa15.54■□□□□ 0.08
SFSWAP-204ENST00000535399 RAB14P61106 215 aa15.54■□□□□ 0.08
SFSWAP-204ENST00000535399 IFITM2Q01629 132 aa15.54■□□□□ 0.08
SFSWAP-204ENST00000535399 AP1S3Q96PC3 154 aa15.54■□□□□ 0.08
SFSWAP-204ENST00000535399 SIVA1O15304 175 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 LINC00315P59091 139 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 RAB4BP61018 213 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 TMEM241Q24JQ0 296 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 WDR73Q6P4I2 378 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 ATP6V0E2Q8NHE4 81 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 GTSF1Q8WW33 167 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 FAT2Q9NYQ8 4349 aa15.53■□□□□ 0.08
SFSWAP-204ENST00000535399 TTC32Q5I0X7 151 aa15.52■□□□□ 0.08
SFSWAP-204ENST00000535399 C1orf134Q5TEV5 83 aa15.52■□□□□ 0.08
SFSWAP-204ENST00000535399 CNFNQ9BYD5 112 aa15.52■□□□□ 0.08
SFSWAP-204ENST00000535399 TRBV10-1A0A0K0K1A3 114 aa15.51■□□□□ 0.07
SFSWAP-204ENST00000535399 ZNF56Q15929 161 aa15.51■□□□□ 0.07
SFSWAP-204ENST00000535399 CT83Q5H943 113 aa15.51■□□□□ 0.07
SFSWAP-204ENST00000535399 WFDC10BQ8IUB3 73 aa15.51■□□□□ 0.07
SFSWAP-204ENST00000535399 GTSF1LQ9H1H1 148 aa15.51■□□□□ 0.07
SFSWAP-204ENST00000535399 OSTCQ9NRP0 149 aa15.51■□□□□ 0.07
SFSWAP-204ENST00000535399 A8MWL6 223 aa15.5■□□□□ 0.07
SFSWAP-204ENST00000535399 NTF3P20783 257 aa15.5■□□□□ 0.07
SFSWAP-204ENST00000535399 RPL23P62829 140 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-204ENST00000535399 CLLU1Q5K131 121 aa15.5■□□□□ 0.07
SFSWAP-204ENST00000535399 NAT8Q9UHE5 227 aa15.5■□□□□ 0.07
SFSWAP-204ENST00000535399 SMIM17P0DL12 118 aa15.49■□□□□ 0.07
SFSWAP-204ENST00000535399 SOHLH1Q5JUK2 328 aa15.49■□□□□ 0.07
SFSWAP-204ENST00000535399 LINC00336Q6ZUF6 198 aa15.49■□□□□ 0.07
SFSWAP-204ENST00000535399 ISOC2Q96AB3 205 aa15.49■□□□□ 0.07
SFSWAP-204ENST00000535399 LELP1Q5T871 98 aa15.48■□□□□ 0.07
SFSWAP-204ENST00000535399 C6orf223Q8N319 242 aa15.48■□□□□ 0.07
SFSWAP-204ENST00000535399 F5H697 171 aa15.47■□□□□ 0.07
SFSWAP-204ENST00000535399 TRGC1P0CF51 173 aa15.47■□□□□ 0.07
SFSWAP-204ENST00000535399 EVI2AP22794 236 aa15.47■□□□□ 0.07
SFSWAP-204ENST00000535399 FOXA3P55318 350 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-204ENST00000535399 OR10G8Q8NGN5 311 aa15.47■□□□□ 0.07
SFSWAP-204ENST00000535399 DNAH10OSP0CZ25 163 aa15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 RPL36AP83881 106 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 ADIRFQ15847 76 aa15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 NEXN-AS1Q8NBZ9 246 aa15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 TSKUQ8WUA8 353 aa15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 RPL36ALQ969Q0 106 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 V9GYV3 84 aa15.46■□□□□ 0.07
SFSWAP-204ENST00000535399 TRBV7-3A0A075B6L6 115 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 MGPP08493 103 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 UBE2D3P61077 147 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 UBE2D2P62837 147 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 TWIST1Q15672 202 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 C15orf54Q8N8G6 183 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 PGLYRP4Q96LB8 373 aa15.45■□□□□ 0.06
SFSWAP-204ENST00000535399 TRAV8-6A0A0B4J262 113 aa15.44■□□□□ 0.06
SFSWAP-204ENST00000535399 OR10J3Q5JRS4 329 aa15.44■□□□□ 0.06
SFSWAP-204ENST00000535399 GFRA4Q9GZZ7 299 aa15.44■□□□□ 0.06
SFSWAP-204ENST00000535399 DPH3P1Q9H4G8 78 aa15.44■□□□□ 0.06
SFSWAP-204ENST00000535399 BIRC6Q9NR09 4857 aa15.43■□□□□ 0.06
SFSWAP-204ENST00000535399 PRSS29PA6NIE9 313 aa15.43■□□□□ 0.06
SFSWAP-204ENST00000535399 BTF3P20290 206 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-204ENST00000535399 SUMO4Q6EEV6 95 aa15.43■□□□□ 0.06
SFSWAP-204ENST00000535399 HECTD4Q9Y4D8 3996 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms