RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 IGF1P05019 195 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 C3orf56Q8N813 242 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 COL6A3P12111 3177 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 EYSQ5T1H1 3165 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 A8MWV9 139 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 TMEM238C9JI98 176 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 CCL24O00175 119 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 HLA-DRB4P13762 266 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 CRIP1P50238 77 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 A0A096LPF7 62 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 JPT2Q9H910 190 aa9.52□□□□□ -0.89
RAD50-209ENST00000533482 RBAKDNA6NC62 111 aa9.51□□□□□ -0.89
RAD50-209ENST00000533482 ZNRF2Q8NHG8 242 aa9.51□□□□□ -0.89
RAD50-209ENST00000533482 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
RAD50-209ENST00000533482 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
RAD50-209ENST00000533482 LY6LH3BQJ8 138 aa9.51□□□□□ -0.89
RAD50-209ENST00000533482 TRBV25-1A0A075B6N4 114 aa9.5□□□□□ -0.89
RAD50-209ENST00000533482 LINC00158P58513 81 aa9.5□□□□□ -0.89
RAD50-209ENST00000533482 TTC32Q5I0X7 151 aa9.5□□□□□ -0.89
RAD50-209ENST00000533482 H3BMG7 143 aa9.5□□□□□ -0.89
RAD50-209ENST00000533482 M0R2P5 195 aa9.5□□□□□ -0.89
RAD50-209ENST00000533482 AZU1P20160 251 aa9.5□□□□□ -0.89
RAD50-209ENST00000533482 VWC2LB2RUY7 222 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 I3L3M4 83 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 DEFB125Q8N687 156 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 A0A1B0GV72 72 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 H3BUA1 57 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 MALP21145 153 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
RAD50-209ENST00000533482 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
RAD50-209ENST00000533482 MRPL53Q96EL3 112 aaKnown RBP9.49□□□□□ -0.89
RAD50-209ENST00000533482 K7EP13 123 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 MYCNOSP40205 109 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 CTRLP40313 264 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 PRIMA1Q86XR5 153 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 SCRT2Q9NQ03 307 aa9.49□□□□□ -0.89
RAD50-209ENST00000533482 COL5A1P20908 1838 aaPredicted RBP9.48□□□□□ -0.89
RAD50-209ENST00000533482 Q6ZS46 218 aa9.48□□□□□ -0.89
RAD50-209ENST00000533482 SIGMAR1Q99720 223 aa9.48□□□□□ -0.89
RAD50-209ENST00000533482 A6NDX4 124 aa9.48□□□□□ -0.89
RAD50-209ENST00000533482 ATP6V0BQ99437 205 aa9.48□□□□□ -0.89
RAD50-209ENST00000533482 ADAMTS20P59510 1910 aa9.48□□□□□ -0.89
RAD50-209ENST00000533482 DSPP15924 2871 aaKnown RBP9.47□□□□□ -0.89
RAD50-209ENST00000533482 ZNF292O60281 2723 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 A0A1W2PPM0 123 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 C9JAW5 83 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 SRSF2Q01130 221 aaKnown RBP9.47□□□□□ -0.89
RAD50-209ENST00000533482 SUMO4Q6EEV6 95 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 LINC00310P59036 64 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 CEND1Q8N111 149 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 Q8N1Y9 231 aa9.47□□□□□ -0.89
RAD50-209ENST00000533482 FXYD2P54710 66 aa9.46□□□□□ -0.89
RAD50-209ENST00000533482 CFAP161Q6P656 301 aa9.46□□□□□ -0.89
RAD50-209ENST00000533482 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.89
RAD50-209ENST00000533482 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.89
RAD50-209ENST00000533482 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.89
RAD50-209ENST00000533482 J3QQQ9 107 aa9.46□□□□□ -0.9
RAD50-209ENST00000533482 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
RAD50-209ENST00000533482 MDFICQ9P1T7 246 aa9.46□□□□□ -0.9
RAD50-209ENST00000533482 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 ZNF48Q96MX3 618 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 U3KQE9 123 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 F5H768 121 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 K7EP34 96 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 PAX4O43316 350 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 CITED2Q99967 270 aaPredicted RBP9.45□□□□□ -0.9
RAD50-209ENST00000533482 RHODO00212 210 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 ESM1Q9NQ30 184 aa9.45□□□□□ -0.9
RAD50-209ENST00000533482 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 COL4A2P08572 1712 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 TRAV8-3A0A0A6YYJ7 113 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 A0A0J9YXV3 536 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 TNFRSF13BO14836 293 aaPredicted RBP9.44□□□□□ -0.9
RAD50-209ENST00000533482 AVPP01185 164 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 TAX1BP3O14907 124 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 TSPAN13O95857 204 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 KRTAP10-9P60411 292 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 ODF1Q14990 250 aa9.44□□□□□ -0.9
RAD50-209ENST00000533482 RNASE8Q8TDE3 154 aaKnown RBP9.44□□□□□ -0.9
RAD50-209ENST00000533482 TSSC4Q9Y5U2 329 aaPredicted RBP9.44□□□□□ -0.9
RAD50-209ENST00000533482 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
RAD50-209ENST00000533482 GAGE6Q13070 117 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms