RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
GMDS-208ENST00000530927 PNRC1Q12796 327 aaPredicted RBP12.88□□□□□ -0.35
GMDS-208ENST00000530927 SLAQ13239 276 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 ADIRFQ15847 76 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 LINC01559Q495D7 138 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 DMRTA1Q5VZB9 504 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
GMDS-208ENST00000530927 A0A087WWC5 75 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 C7orf77A4D0Y5 90 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 P01737 135 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 MT-ND4LP03901 98 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 Q6ZSN1 163 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 SAMD10Q9BYL1 202 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
GMDS-208ENST00000530927 ERVFC1-1P60608 527 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 LYPD5Q6UWN5 251 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 SLC25A29Q8N8R3 303 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 NUDT10Q8NFP7 164 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 ISOC2Q96AB3 205 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 NUDT11Q96G61 164 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 UPK3BQ9BT76 320 aa12.86□□□□□ -0.35
GMDS-208ENST00000530927 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
GMDS-208ENST00000530927 COLCA2A8K830 154 aa12.85□□□□□ -0.35
GMDS-208ENST00000530927 MRPL23Q16540 153 aaKnown RBP12.85□□□□□ -0.35
GMDS-208ENST00000530927 DNLZQ5SXM8 178 aa12.85□□□□□ -0.35
GMDS-208ENST00000530927 PTH2Q96A98 100 aa12.85□□□□□ -0.35
GMDS-208ENST00000530927 RPS10P5Q9NQ39 176 aa12.85□□□□□ -0.35
GMDS-208ENST00000530927 SRIP30626 198 aa12.84□□□□□ -0.35
GMDS-208ENST00000530927 OSTCQ9NRP0 149 aa12.84□□□□□ -0.35
GMDS-208ENST00000530927 MUC21A0A0G2JKD1 596 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 MUC21A0A140T8X8 626 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 NXPH4O95158 308 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
GMDS-208ENST00000530927 C1orf134Q5TEV5 83 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 NEGR1Q7Z3B1 354 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 OR2D3Q8NGH3 330 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 SFRP2Q96HF1 295 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 RPP21Q9H633 154 aaKnown RBP12.83□□□□□ -0.36
GMDS-208ENST00000530927 SCRT2Q9NQ03 307 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 Q9UF83 564 aa12.83□□□□□ -0.36
GMDS-208ENST00000530927 PKHD1P08F94 4074 aa12.82□□□□□ -0.36
GMDS-208ENST00000530927 XKRY2A2RUG3 117 aa12.82□□□□□ -0.36
GMDS-208ENST00000530927 PRSS29PA6NIE9 313 aa12.82□□□□□ -0.36
GMDS-208ENST00000530927 M0R381 172 aa12.82□□□□□ -0.36
GMDS-208ENST00000530927 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
GMDS-208ENST00000530927 CXCL1P09341 107 aa12.82□□□□□ -0.36
GMDS-208ENST00000530927 A0A1B0GVY2 172 aa12.81□□□□□ -0.36
GMDS-208ENST00000530927 RAB5BP61020 215 aa12.81□□□□□ -0.36
GMDS-208ENST00000530927 UFSP1Q6NVU6 142 aa12.81□□□□□ -0.36
GMDS-208ENST00000530927 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
GMDS-208ENST00000530927 PHLDA3Q9Y5J5 127 aa12.81□□□□□ -0.36
GMDS-208ENST00000530927 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
GMDS-208ENST00000530927 A0A087WWL8 130 aa12.8□□□□□ -0.36
GMDS-208ENST00000530927 GZMBP10144 247 aa12.8□□□□□ -0.36
GMDS-208ENST00000530927 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
GMDS-208ENST00000530927 A8MWV9 139 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 SSTP61278 116 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 CT83Q5H943 113 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 FAM74A4Q5TZK3 123 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 LINC00336Q6ZUF6 198 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 C14orf178Q8N769 122 aaPredicted RBP12.79□□□□□ -0.36
GMDS-208ENST00000530927 OR10AG1Q8NH19 301 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 TRBV6-4A0A1B0GX49 114 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 A8MWL6 223 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 PPP1R2P9O14990 202 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 C6orf223Q8N319 242 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
GMDS-208ENST00000530927 SIVA1O15304 175 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 RHOHQ15669 191 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 PIK3CD-AS1Q5SR53 167 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 ANAPC16Q96DE5 110 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 PRADC1Q9BSG0 188 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 V9GYV3 84 aa12.78□□□□□ -0.36
GMDS-208ENST00000530927 CRYGDP07320 174 aa12.77□□□□□ -0.37
GMDS-208ENST00000530927 TNP2Q05952 138 aa12.77□□□□□ -0.37
GMDS-208ENST00000530927 ZFP2Q6ZN57 461 aa12.77□□□□□ -0.37
GMDS-208ENST00000530927 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
GMDS-208ENST00000530927 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 RAB5AP20339 215 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 GAGE1Q13065 139 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 GAGE4Q13068 117 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 GAGE5Q13069 117 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 ZFP82Q8N141 532 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
GMDS-208ENST00000530927 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
GMDS-208ENST00000530927 SNAI2O43623 268 aa12.75□□□□□ -0.37
GMDS-208ENST00000530927 CIDEAO60543 219 aa12.75□□□□□ -0.37
GMDS-208ENST00000530927 IGLC6P0CF74 106 aa12.75□□□□□ -0.37
GMDS-208ENST00000530927 SSBP4Q9BWG4 385 aaPredicted RBP12.75□□□□□ -0.37
GMDS-208ENST00000530927 GFRA4Q9GZZ7 299 aa12.75□□□□□ -0.37
GMDS-208ENST00000530927 DYNC1H1Q14204 4646 aaKnown RBP12.75□□□□□ -0.37
GMDS-208ENST00000530927 F2Z2F3 143 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms