RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 GLMPQ8WWB7 406 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 DPH3P1Q9H4G8 78 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 LGALS1P09382 135 aaKnown RBP9.49□□□□□ -0.89
CAPN1-208ENST00000527323 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
CAPN1-208ENST00000527323 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
CAPN1-208ENST00000527323 C20orf173Q96LM9 149 aa9.49□□□□□ -0.89
CAPN1-208ENST00000527323 SIRPDQ9H106 197 aa9.49□□□□□ -0.89
CAPN1-208ENST00000527323 FN1P02751 2386 aaKnown RBP9.49□□□□□ -0.89
CAPN1-208ENST00000527323 TRAV21A0A0B4J279 112 aa9.49□□□□□ -0.89
CAPN1-208ENST00000527323 INSL3P51460 131 aa9.49□□□□□ -0.89
CAPN1-208ENST00000527323 NEXN-AS1Q8NBZ9 246 aa9.49□□□□□ -0.89
CAPN1-208ENST00000527323 SLC25A16P16260 332 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 UBE2E1P51965 193 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 ANXA2RQ3ZCQ2 193 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 BAALCQ8WXS3 180 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 C9orf139Q6ZV77 190 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 C20orf78Q9BR46 151 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 C1orf43Q9BWL3 253 aa9.48□□□□□ -0.89
CAPN1-208ENST00000527323 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 NDUFS8O00217 210 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 APOMO95445 188 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 EMP1P54849 157 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 LMO4P61968 165 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 CITED2Q99967 270 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-208ENST00000527323 J3QKU1 62 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 GNRH2O43555 120 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 ARL3P36405 182 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 PSMB2P49721 201 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
CAPN1-208ENST00000527323 SCGB1A1P11684 91 aa9.46□□□□□ -0.89
CAPN1-208ENST00000527323 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.89
CAPN1-208ENST00000527323 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.89
CAPN1-208ENST00000527323 DUX5Q96PT3 197 aa9.46□□□□□ -0.89
CAPN1-208ENST00000527323 U3KQE9 123 aa9.46□□□□□ -0.89
CAPN1-208ENST00000527323 F6UB75 175 aa9.46□□□□□ -0.9
CAPN1-208ENST00000527323 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
CAPN1-208ENST00000527323 ZNF418Q8TF45 676 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-208ENST00000527323 LENEPQ9Y5L5 61 aa9.46□□□□□ -0.9
CAPN1-208ENST00000527323 TRAV41A0A0B4J266 112 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 SPXQ9BT56 116 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 OVOL1O14753 267 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 HIST2H2BDQ6DRA6 164 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 DLX4Q92988 240 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-208ENST00000527323 F5H697 171 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
CAPN1-208ENST00000527323 AVPP01185 164 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 NOTCH3Q9UM47 2321 aa9.45□□□□□ -0.9
CAPN1-208ENST00000527323 A0A1B0GV72 72 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 LINC01619G3V211 115 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 NPFFO15130 113 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 AJUBAQ96IF1 538 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 SPATA25Q9BR10 227 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 BAHCC1Q9P281 2608 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 IGHV3-11P01762 117 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
CAPN1-208ENST00000527323 IGHV4-38-2P0DP08 117 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 HERVK_113P61574 105 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 LY6EQ16553 131 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 PPP1R17O96001 155 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 AKAP9Q99996 3911 aa9.43□□□□□ -0.9
CAPN1-208ENST00000527323 SRD5A1P18405 259 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 TP53TG1Q9Y2A0 90 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 HIVEP1P15822 2718 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 FOXI1Q12951 378 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 TGFAP01135 160 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 SCGB1C2P0DMR2 95 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 KLK9Q2XQG4 91 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 C10orf105Q8TEF2 133 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 CITED1Q99966 193 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 KLK9Q9UKQ9 250 aa9.42□□□□□ -0.9
CAPN1-208ENST00000527323 FAM223BA6NKX1 122 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 TSPAN13O95857 204 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 GPHB5Q86YW7 130 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 FAM223AQ8IWN6 122 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 PTH2Q96A98 100 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 A0A087WWL8 130 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 CKS1BP61024 79 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 C1QTNF4Q9BXJ3 329 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 JPT2Q9H910 190 aa9.41□□□□□ -0.9
CAPN1-208ENST00000527323 RNASE3P12724 160 aaKnown RBP9.4□□□□□ -0.9
CAPN1-208ENST00000527323 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
CAPN1-208ENST00000527323 CFAP126Q5VTH2 177 aa9.4□□□□□ -0.9
CAPN1-208ENST00000527323 Q96MF0 132 aa9.4□□□□□ -0.9
CAPN1-208ENST00000527323 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
CAPN1-208ENST00000527323 MOB4Q9Y3A3 225 aa9.4□□□□□ -0.9
CAPN1-208ENST00000527323 FAM159AQ6UWV7 190 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms