RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 TSKUQ8WUA8 353 aa2□□□□□ -2.09
ATM-208ENST00000525537 CCL19Q99731 98 aa2□□□□□ -2.09
ATM-208ENST00000525537 SERP1Q9Y6X1 66 aa2□□□□□ -2.09
ATM-208ENST00000525537 KIAA0100Q14667 2235 aaKnown RBP2□□□□□ -2.09
ATM-208ENST00000525537 DAPK1P53355 1430 aa2□□□□□ -2.09
ATM-208ENST00000525537 ZNF142P52746 1687 aaPredicted RBP1.99□□□□□ -2.09
ATM-208ENST00000525537 MUC6Q6W4X9 2439 aa1.99□□□□□ -2.09
ATM-208ENST00000525537 TEX49A0A1B0GTD5 131 aa1.99□□□□□ -2.09
ATM-208ENST00000525537 SPAARA0A1B0GVQ0 90 aa1.99□□□□□ -2.09
ATM-208ENST00000525537 C5orf56Q8N8D9 126 aa1.99□□□□□ -2.09
ATM-208ENST00000525537 GNG8Q9UK08 70 aa1.99□□□□□ -2.09
ATM-208ENST00000525537 MUC22E2RYF6 1773 aaPredicted RBP1.99□□□□□ -2.09
ATM-208ENST00000525537 AFDNP55196 1824 aaKnown RBP1.98□□□□□ -2.09
ATM-208ENST00000525537 CAV3P56539 151 aa1.98□□□□□ -2.09
ATM-208ENST00000525537 UBE2G1P62253 170 aa1.98□□□□□ -2.09
ATM-208ENST00000525537 Q6AWC8 147 aa1.98□□□□□ -2.09
ATM-208ENST00000525537 RPL7L1Q6DKI1 246 aaKnown RBP1.98□□□□□ -2.09
ATM-208ENST00000525537 LSM10Q969L4 123 aaKnown RBP1.98□□□□□ -2.09
ATM-208ENST00000525537 RIMS1Q86UR5 1692 aaKnown RBP1.98□□□□□ -2.09
ATM-208ENST00000525537 RREB1Q92766 1687 aa1.98□□□□□ -2.09
ATM-208ENST00000525537 ZNF518AQ6AHZ1 1483 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 A6NIN4 97 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 F6UZH7 168 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 CORTO00230 105 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 Q56UQ5 140 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 ABCA4P78363 2273 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 BCORL1Q5H9F3 1711 aa1.97□□□□□ -2.09
ATM-208ENST00000525537 FAM135AQ9P2D6 1515 aa1.96□□□□□ -2.09
ATM-208ENST00000525537 TRAV12-3A0A0B4J271 114 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 TRBV30A0A0K0K1B3 111 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 TCRBV3S1A0A5B6 114 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 MCRIP1C9JLW8 97 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 CBLN1P23435 193 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 Q86TA4 180 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 RPRMQ9NS64 109 aa1.96□□□□□ -2.1
ATM-208ENST00000525537 BLMP54132 1417 aaPredicted RBP1.96□□□□□ -2.1
ATM-208ENST00000525537 ROS1P08922 2347 aa1.95□□□□□ -2.1
ATM-208ENST00000525537 MIF4GDA9UHW6 222 aaKnown RBP1.95□□□□□ -2.1
ATM-208ENST00000525537 NPC2P61916 151 aa1.95□□□□□ -2.1
ATM-208ENST00000525537 Q6ZS92 163 aa1.95□□□□□ -2.1
ATM-208ENST00000525537 A2ML1A8K2U0 1454 aa1.94□□□□□ -2.1
ATM-208ENST00000525537 S100PP25815 95 aa1.94□□□□□ -2.1
ATM-208ENST00000525537 MRPS10P82664 201 aaKnown RBP1.94□□□□□ -2.1
ATM-208ENST00000525537 CYP2G1PQ6ZSU1 146 aa1.94□□□□□ -2.1
ATM-208ENST00000525537 CNTRLQ7Z7A1 2325 aa1.94□□□□□ -2.1
ATM-208ENST00000525537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.93□□□□□ -2.1
ATM-208ENST00000525537 S100A1P23297 94 aa1.93□□□□□ -2.1
ATM-208ENST00000525537 KRTAP10-4P60372 401 aaPredicted RBP1.93□□□□□ -2.1
ATM-208ENST00000525537 S100A7L2Q5SY68 101 aa1.93□□□□□ -2.1
ATM-208ENST00000525537 C12orf73Q69YU5 71 aa1.93□□□□□ -2.1
ATM-208ENST00000525537 HELZ2Q9BYK8 2649 aaKnown RBP1.93□□□□□ -2.1
ATM-208ENST00000525537 TNFP01375 233 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 IFNA17P01571 189 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 GNG4P50150 75 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 ZNF56Q15929 161 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 C10orf99Q6UWK7 81 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 C10orf82Q8WW14 230 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 QRICH2Q9H0J4 1663 aa1.92□□□□□ -2.1
ATM-208ENST00000525537 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 CUL7Q14999 1698 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 APOC4-APOC2K7ER74 178 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 FXYD1O00168 92 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 SNAPC5O75971 98 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 APOC2P02655 101 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 PPP1R1CQ8WVI7 109 aa1.91□□□□□ -2.1
ATM-208ENST00000525537 ESPL1Q14674 2120 aa1.9□□□□□ -2.1
ATM-208ENST00000525537 MYOM2P54296 1465 aa1.9□□□□□ -2.11
ATM-208ENST00000525537 TPPP2P59282 170 aa1.9□□□□□ -2.11
ATM-208ENST00000525537 KLKP1Q107X0 134 aa1.9□□□□□ -2.11
ATM-208ENST00000525537 Q8N8P6 123 aa1.9□□□□□ -2.11
ATM-208ENST00000525537 PLXNA1Q9UIW2 1896 aa1.9□□□□□ -2.11
ATM-208ENST00000525537 IFT140Q96RY7 1462 aa1.89□□□□□ -2.11
ATM-208ENST00000525537 PIGBOS1A0A0B4J2F0 54 aa1.89□□□□□ -2.11
ATM-208ENST00000525537 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
ATM-208ENST00000525537 COA4Q9NYJ1 87 aa1.89□□□□□ -2.11
ATM-208ENST00000525537 BET1LQ9NYM9 111 aa1.89□□□□□ -2.11
ATM-208ENST00000525537 KTN1Q86UP2 1357 aaKnown RBP1.88□□□□□ -2.11
ATM-208ENST00000525537 TRBV10-3A0A0K0K1G6 114 aa1.88□□□□□ -2.11
ATM-208ENST00000525537 ATP6V1G2-DDX39BF2Z307 99 aa1.88□□□□□ -2.11
ATM-208ENST00000525537 CATR1Q13166 79 aa1.88□□□□□ -2.11
ATM-208ENST00000525537 Q8N6K4 173 aa1.88□□□□□ -2.11
ATM-208ENST00000525537 C12orf57Q99622 126 aa1.88□□□□□ -2.11
ATM-208ENST00000525537 IER3IP1Q9Y5U9 82 aa1.88□□□□□ -2.11
ATM-208ENST00000525537 CCL3L1P16619 93 aa1.87□□□□□ -2.11
ATM-208ENST00000525537 PPP3R1P63098 170 aa1.87□□□□□ -2.11
ATM-208ENST00000525537 MRPL54Q6P161 138 aaKnown RBP1.87□□□□□ -2.11
ATM-208ENST00000525537 NRXN2Q9P2S2 1712 aa1.87□□□□□ -2.11
ATM-208ENST00000525537 ZDBF2Q9HCK1 2354 aa1.87□□□□□ -2.11
ATM-208ENST00000525537 RBBP6Q7Z6E9 1792 aaKnown RBP1.87□□□□□ -2.11
ATM-208ENST00000525537 KDM6BO15054 1643 aa1.87□□□□□ -2.11
ATM-208ENST00000525537 A0A1W2PPM0 123 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 UBE2D1P51668 147 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 CCL8P80075 99 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 RBM3P98179 157 aaKnown RBP1.86□□□□□ -2.11
ATM-208ENST00000525537 INSL4Q14641 139 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 C20orf197Q8N268 126 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 PPP3R2Q96LZ3 170 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 SPANXDQ9BXN6 97 aa1.86□□□□□ -2.11
ATM-208ENST00000525537 LAMA4Q16363 1823 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms