RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 STHQ8IWL8 128 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 F5H697 171 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 DEFB125Q8N687 156 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 C18orf15Q96N68 181 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 PRM2P04554 102 aa11.22□□□□□ -0.61
BEST1-204ENST00000524926 LINC00315P59091 139 aa11.22□□□□□ -0.61
BEST1-204ENST00000524926 SUMO2P61956 95 aaKnown RBP11.22□□□□□ -0.61
BEST1-204ENST00000524926 TMEM158Q8WZ71 300 aa11.22□□□□□ -0.61
BEST1-204ENST00000524926 IFI27L1Q96BM0 104 aa11.22□□□□□ -0.61
BEST1-204ENST00000524926 FOSL1P15407 271 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 LAGE3Q14657 143 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 NDUFA11Q86Y39 141 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 LINC01545Q5VT33 79 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 LINC01587Q99440 93 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
BEST1-204ENST00000524926 IGLL1P15814 213 aa11.2□□□□□ -0.62
BEST1-204ENST00000524926 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
BEST1-204ENST00000524926 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
BEST1-204ENST00000524926 PPP1R17O96001 155 aa11.2□□□□□ -0.62
BEST1-204ENST00000524926 PF4P02776 101 aa11.2□□□□□ -0.62
BEST1-204ENST00000524926 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
BEST1-204ENST00000524926 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
BEST1-204ENST00000524926 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
BEST1-204ENST00000524926 INSP01308 110 aa11.19□□□□□ -0.62
BEST1-204ENST00000524926 IGLV1-51P01701 117 aa11.19□□□□□ -0.62
BEST1-204ENST00000524926 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
BEST1-204ENST00000524926 NSD1Q96L73 2696 aaPredicted RBP11.19□□□□□ -0.62
BEST1-204ENST00000524926 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
BEST1-204ENST00000524926 LINC00469Q8N7U9 141 aa11.19□□□□□ -0.62
BEST1-204ENST00000524926 HSBP1L1C9JCN9 74 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 CRLF1O75462 422 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 NUDT3O95989 172 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 IGLC3P0DOY3 106 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 ZNF56Q15929 161 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 CLUHP3Q96NS8 147 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 TMEM208Q9BTX3 173 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 UQCR10Q9UDW1 63 aa11.18□□□□□ -0.62
BEST1-204ENST00000524926 CRYGDP07320 174 aa11.17□□□□□ -0.62
BEST1-204ENST00000524926 CMC4P56277 68 aaPredicted RBP11.17□□□□□ -0.62
BEST1-204ENST00000524926 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
BEST1-204ENST00000524926 CSTL1Q9H114 145 aa11.17□□□□□ -0.62
BEST1-204ENST00000524926 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
BEST1-204ENST00000524926 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
BEST1-204ENST00000524926 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
BEST1-204ENST00000524926 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 PRSS1P07477 247 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 LGALS9BQ3B8N2 356 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 LGALS9CQ6DKI2 356 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 ORMDL2Q53FV1 153 aa11.16□□□□□ -0.62
BEST1-204ENST00000524926 NEGR1Q7Z3B1 354 aa11.15□□□□□ -0.62
BEST1-204ENST00000524926 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
BEST1-204ENST00000524926 Q6ZN92 141 aa11.15□□□□□ -0.63
BEST1-204ENST00000524926 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.63
BEST1-204ENST00000524926 M0R2P5 195 aa11.14□□□□□ -0.63
BEST1-204ENST00000524926 ATP5LO75964 103 aa11.14□□□□□ -0.63
BEST1-204ENST00000524926 K7EMI3 77 aa11.14□□□□□ -0.63
BEST1-204ENST00000524926 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
BEST1-204ENST00000524926 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
BEST1-204ENST00000524926 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
BEST1-204ENST00000524926 IGHV3-73A0A0B4J1V6 119 aa11.13□□□□□ -0.63
BEST1-204ENST00000524926 M0QY20 66 aa11.13□□□□□ -0.63
BEST1-204ENST00000524926 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
BEST1-204ENST00000524926 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
BEST1-204ENST00000524926 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
BEST1-204ENST00000524926 SDHAF1A6NFY7 115 aa11.12□□□□□ -0.63
BEST1-204ENST00000524926 VCYO14598 125 aa11.12□□□□□ -0.63
BEST1-204ENST00000524926 AZU1P20160 251 aa11.12□□□□□ -0.63
BEST1-204ENST00000524926 HNRNPA3P51991 378 aaKnown RBP11.12□□□□□ -0.63
BEST1-204ENST00000524926 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
BEST1-204ENST00000524926 C11orf72Q8NBR9 251 aa11.12□□□□□ -0.63
BEST1-204ENST00000524926 M0R143 59 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
BEST1-204ENST00000524926 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 EREGO14944 169 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
BEST1-204ENST00000524926 SCGB3A1Q96QR1 104 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 JMJD1CQ15652 2540 aa11.11□□□□□ -0.63
BEST1-204ENST00000524926 A8MWV9 139 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.1□□□□□ -0.63
BEST1-204ENST00000524926 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
BEST1-204ENST00000524926 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
BEST1-204ENST00000524926 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 TOMM6Q96B49 74 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 ODF1Q14990 250 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 STPG4Q8N801 248 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 SPXQ9BT56 116 aa11.1□□□□□ -0.63
BEST1-204ENST00000524926 MRPL16Q9NX20 251 aaKnown RBP11.1□□□□□ -0.63
BEST1-204ENST00000524926 FLNBO75369 2602 aaKnown RBP11.09□□□□□ -0.63
BEST1-204ENST00000524926 NOTCH3Q9UM47 2321 aa11.09□□□□□ -0.63
BEST1-204ENST00000524926 TCTAP57738 103 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms