RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 TRAV13-2A0A0B4J235 113 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 H3BRM9 83 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 SIX6O95475 246 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 LYPD5Q6UWN5 251 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 ST20Q9HBF5 79 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 LAMB1P07942 1786 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 DOCK1Q14185 1865 aa2.58□□□□□ -2
SMARCE1P4-201ENST00000523647 PCNX2A6NKB5 2137 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 SHROOM2Q13796 1616 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 PPLO60437 1756 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 MYO16Q9Y6X6 1858 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 IGLV4-60A0A075B6I1 120 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 PDCD5O14737 125 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 NDUFC1O43677 76 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 DEFB134Q4QY38 66 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 LYPD1Q8N2G4 141 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 FAM213BQ8TBF2 198 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 AMELYQ99218 206 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 ARHGAP32A7KAX9 2087 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 NACAE9PAV3 2078 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 FREM3P0C091 2139 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 CLIP1P30622 1438 aa2.57□□□□□ -2
SMARCE1P4-201ENST00000523647 ANK1P16157 1881 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 CUL9Q8IWT3 2517 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 TRBV7-1A0A0A6YYK4 115 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 TMEM30CPA0ZSE6 113 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 CTSGP08311 255 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 MOBPQ13875 183 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 ADIRFQ15847 76 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 MPV17LQ2QL34 196 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 PYDC2Q56P42 97 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 C4orf3Q8WVX3 66 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 ADAMTS12P58397 1594 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 LAMB2P55268 1798 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 PTPRFP10586 1907 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 KIAA2026Q5HYC2 2103 aa2.56□□□□□ -2
SMARCE1P4-201ENST00000523647 SYS1-DBNDD2H3BUS1 97 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 KDM6BO15054 1643 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 FANCAO15360 1455 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 PRB4P10163 310 aaPredicted RBP2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 DEFA5Q01523 94 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 TPRXLQ17RH7 258 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 MON2Q7Z3U7 1717 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 LINC01600Q96MT4 127 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 DIDO1Q9BTC0 2240 aaKnown RBP2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 TIMM21Q9BVV7 248 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 CDK12Q9NYV4 1490 aaPredicted RBP2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 SPCS1Q9Y6A9 102 aa2.55□□□□□ -2
SMARCE1P4-201ENST00000523647 TRPM7Q96QT4 1865 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 PLXNA4Q9HCM2 1894 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 MUC22E2RYF6 1773 aaPredicted RBP2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 LRRIQ1Q96JM4 1722 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 TNS1Q9HBL0 1735 aaKnown RBP2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 COL4A5P29400 1685 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 DIP2BQ9P265 1576 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 SLIT3O75094 1523 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 EPRSP07814 1512 aaKnown RBP2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 NCOA2Q15596 1464 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 COL1A2P08123 1366 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 IGKV2D-24A0A075B6R9 120 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 A0A0J9YY99 117 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 A0A1W2PPM0 123 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 IGLC2P0DOY2 106 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 IGLC3P0DOY3 106 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 ELOBQ15370 118 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 CSAG1Q6PB30 78 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 ZNF818PQ6ZRF7 136 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 CMTM2Q8TAZ6 248 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 PATE1Q8WXA2 126 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 IFI27L1Q96BM0 104 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 FAM167A-AS1Q96KT0 104 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 LAMB4A4D0S4 1761 aa2.54□□□□□ -2
SMARCE1P4-201ENST00000523647 HEATR5BQ9P2D3 2071 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 TRAV12-3A0A0B4J271 114 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 A0A0G2JQZ4 141 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 TRBV10-1A0A0K0K1A3 114 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 CRYM-AS1A6NIL9 109 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 H7BZZ5 65 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 TFF1P04155 84 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 ETDBQ3ZM63 59 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 NMSQ5H8A3 153 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 ODF3Q96PU9 254 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 ADAMTS7Q9UKP4 1686 aa2.53□□□□□ -2
SMARCE1P4-201ENST00000523647 SNRNP200O75643 2136 aaKnown RBP2.53□□□□□ -2.01
SMARCE1P4-201ENST00000523647 COL11A1P12107 1806 aaPredicted RBP2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 CACNA1DQ01668 2161 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 UBE2D3P61077 147 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 UBE2D2P62837 147 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 WFDC2Q14508 124 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 BVES-AS1Q5T3Y7 98 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 SPACA4Q8TDM5 124 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 NXT2Q9NPJ8 142 aaKnown RBP2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 ORMDL1Q9P0S3 153 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 MYH8P13535 1937 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
SMARCE1P4-201ENST00000523647 ATP10BO94823 1461 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms