RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 SPTBN4Q9H254 2564 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 A0A0J9YX75 114 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 TEX48A0A1B0GUV7 120 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 F8W1H4 67 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 VPS13CQ709C8 3753 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 TRAV12-2A0A075B6T6 113 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 TRBV27A0A0K0K1C4 114 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 IGKV3-20P01619 116 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 SNRPD3P62318 126 aaKnown RBP13.3□□□□□ -0.28
IKBKB-228ENST00000523517 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 MDFICQ9P1T7 246 aa13.3□□□□□ -0.28
IKBKB-228ENST00000523517 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
IKBKB-228ENST00000523517 SCGB1D4Q6XE38 83 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 KLHL30-AS1Q8NEE0 82 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 TMEM89A2RUT3 159 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 H3BMG7 143 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 K7EQG2 157 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 EMP1P54849 157 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 WFDC2Q14508 124 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 FAM74A4Q5TZK3 123 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 MUC4Q99102 2169 aa13.29□□□□□ -0.28
IKBKB-228ENST00000523517 HERVK_113P61574 105 aa13.28□□□□□ -0.28
IKBKB-228ENST00000523517 SYT8Q8NBV8 401 aa13.28□□□□□ -0.28
IKBKB-228ENST00000523517 MORN3Q6PF18 240 aaPredicted RBP13.28□□□□□ -0.28
IKBKB-228ENST00000523517 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
IKBKB-228ENST00000523517 Q8N1Y9 231 aa13.28□□□□□ -0.28
IKBKB-228ENST00000523517 DSCR9P59020 149 aa13.27□□□□□ -0.29
IKBKB-228ENST00000523517 M0QY20 66 aa13.27□□□□□ -0.29
IKBKB-228ENST00000523517 SRSF9Q13242 221 aaKnown RBP eCLIP13.27□□□□□ -0.29
IKBKB-228ENST00000523517 IGHV1OR15-1A0A075B7D0 117 aa13.26□□□□□ -0.29
IKBKB-228ENST00000523517 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
IKBKB-228ENST00000523517 A6NJY4 79 aa13.26□□□□□ -0.29
IKBKB-228ENST00000523517 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
IKBKB-228ENST00000523517 ZNF256Q9Y2P7 627 aaPredicted RBP13.26□□□□□ -0.29
IKBKB-228ENST00000523517 ZNF56Q15929 161 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 NRGNQ92686 78 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 SPINK13Q1W4C9 94 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 ZNF876PQ49A33 203 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 LINC01356Q8N9X3 169 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 PGPEP1Q9NXJ5 209 aa13.25□□□□□ -0.29
IKBKB-228ENST00000523517 UBE2D1P51668 147 aa13.24□□□□□ -0.29
IKBKB-228ENST00000523517 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
IKBKB-228ENST00000523517 ZNRF2Q8NHG8 242 aa13.24□□□□□ -0.29
IKBKB-228ENST00000523517 A0A0J9YY99 117 aa13.23□□□□□ -0.29
IKBKB-228ENST00000523517 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
IKBKB-228ENST00000523517 RHOHQ15669 191 aa13.23□□□□□ -0.29
IKBKB-228ENST00000523517 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
IKBKB-228ENST00000523517 TRPT1Q86TN4 253 aaKnown RBP13.23□□□□□ -0.29
IKBKB-228ENST00000523517 MRPL16Q9NX20 251 aaKnown RBP13.23□□□□□ -0.29
IKBKB-228ENST00000523517 PRO0461Q9UI25 63 aa13.23□□□□□ -0.29
IKBKB-228ENST00000523517 TSPEAR-AS2P59090 65 aa13.22□□□□□ -0.29
IKBKB-228ENST00000523517 AGRNO00468 2067 aa13.22□□□□□ -0.29
IKBKB-228ENST00000523517 DUX5Q96PT3 197 aa13.21□□□□□ -0.29
IKBKB-228ENST00000523517 SH2D6Q7Z4S9 175 aa13.21□□□□□ -0.3
IKBKB-228ENST00000523517 COL12A1Q99715 3063 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 J3QLI3 93 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 P0DMU3 169 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 FAM231AP0DMU4 169 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 FAM231CP0DMU5 169 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 ETDBQ3ZM63 59 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 MTURNQ8N3F0 131 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 HOXD3P31249 432 aaPredicted RBP13.2□□□□□ -0.3
IKBKB-228ENST00000523517 NFE4Q86UQ8 179 aa13.2□□□□□ -0.3
IKBKB-228ENST00000523517 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
IKBKB-228ENST00000523517 A0A096LNT2 108 aa13.19□□□□□ -0.3
IKBKB-228ENST00000523517 TSPAN13O95857 204 aa13.19□□□□□ -0.3
IKBKB-228ENST00000523517 TGFAP01135 160 aa13.19□□□□□ -0.3
IKBKB-228ENST00000523517 ELANEP08246 267 aa13.19□□□□□ -0.3
IKBKB-228ENST00000523517 TRGV11A0A075B6L2 103 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 SLC25A29Q8N8R3 303 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 AMELXQ99217 191 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 I3L3M4 83 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 J3QQQ9 107 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 J3QR89 54 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
IKBKB-228ENST00000523517 APOMO95445 188 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 NDUFA11Q86Y39 141 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 MAPK1IP1LQ8NDC0 245 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 ZNF702PQ9H963 129 aa13.17□□□□□ -0.3
IKBKB-228ENST00000523517 SPG11Q96JI7 2443 aa13.16□□□□□ -0.3
IKBKB-228ENST00000523517 LGALS3P17931 250 aaKnown RBP13.16□□□□□ -0.3
IKBKB-228ENST00000523517 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
IKBKB-228ENST00000523517 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
IKBKB-228ENST00000523517 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 RBMY1A1P0DJD3 496 aaKnown RBP13.15□□□□□ -0.3
IKBKB-228ENST00000523517 RBMY1CP0DJD4 496 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 RBMY1FQ15415 496 aaKnown RBP13.15□□□□□ -0.3
IKBKB-228ENST00000523517 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 TSSC4Q9Y5U2 329 aaPredicted RBP13.15□□□□□ -0.3
IKBKB-228ENST00000523517 LOC107984156A0A0G2JMH3 177 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 UBE2D3P61077 147 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 UBE2D2P62837 147 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms