RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ZNF479Q96JC4 524 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 A0A0J9YWU9 116 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 GAS8-AS1O95177 125 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 DPH3P1Q9H4G8 78 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 TGP01266 2768 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 MT-ND6P03923 174 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 MIFP14174 115 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 DAD1P61803 113 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 SPATA25Q9BR10 227 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 TMEM191AQ9H0A3 160 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 A0A1B0GW15 77 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 A8MZ25 164 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
SDCBP-212ENST00000523483 CNFNQ9BYD5 112 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 SMIM9A6NGZ8 99 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 RAB5BP61020 215 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 Q8NAQ8 132 aa6.69□□□□□ -1.34
SDCBP-212ENST00000523483 P0DMU3 169 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 FAM231AP0DMU4 169 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 FAM231CP0DMU5 169 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 A8MWV9 139 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 S100A6P06703 90 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 RAB4AP20338 218 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 PDZD11Q5EBL8 140 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 CFAP126Q5VTH2 177 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 SPART-AS1P0CW21 52 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 COX19Q49B96 90 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 DNLZQ5SXM8 178 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 RASL11AQ6T310 242 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 RPL39LQ96EH5 51 aaKnown RBP6.68□□□□□ -1.34
SDCBP-212ENST00000523483 LINC00467Q9BRT7 94 aa6.68□□□□□ -1.34
SDCBP-212ENST00000523483 NDUFA6P56556 154 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 DAZ2Q13117 558 aaKnown RBP6.67□□□□□ -1.34
SDCBP-212ENST00000523483 ORMDL3Q8N138 153 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 RASL10AQ92737 203 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 PRELID3AQ96N28 172 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 DKK2Q9UBU2 259 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 F5H768 121 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 CRYGDP07320 174 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 POM121L12Q8N7R1 296 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 A0A0J9YY99 117 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 SUMO4Q6EEV6 95 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 NEGR1Q7Z3B1 354 aa6.67□□□□□ -1.34
SDCBP-212ENST00000523483 IGHV4-4A0A075B6R2 117 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 RNF185Q96GF1 192 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 NANOS2P60321 138 aaKnown RBP6.66□□□□□ -1.34
SDCBP-212ENST00000523483 Q9UF83 564 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
SDCBP-212ENST00000523483 A0A096LPF7 62 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 NPYP01303 97 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 LGALS9BQ3B8N2 356 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 Q6ZSN1 163 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 GATD1Q8NB37 220 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 TP53TG1Q9Y2A0 90 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 NXPH4O95158 308 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 RNASEKQ6P5S7 137 aaKnown RBP6.65□□□□□ -1.34
SDCBP-212ENST00000523483 FBN3Q75N90 2809 aa6.65□□□□□ -1.34
SDCBP-212ENST00000523483 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.35
SDCBP-212ENST00000523483 PRSS3P2Q8NHM4 247 aa6.65□□□□□ -1.35
SDCBP-212ENST00000523483 DNAH3Q8TD57 4116 aa6.65□□□□□ -1.35
SDCBP-212ENST00000523483 IGHV3-38A0A0C4DH36 116 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 LYRM9A8MSI8 78 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 Q6ZTC4 211 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 IL17DQ8TAD2 202 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 PHLDA1Q8WV24 401 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-212ENST00000523483 TM2D3Q9BRN9 247 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 ALKBH7Q9BT30 221 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-212ENST00000523483 TNFRSF6BO95407 300 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 LOC100131303A0A0U1RQF7 123 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 GAGE12JA6NER3 117 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 RHODO00212 210 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 GAGE1Q13065 139 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 GAGE4Q13068 117 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 GAGE5Q13069 117 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 GAGE13Q4V321 117 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 KIF25-AS1Q9Y6Z4 181 aa6.64□□□□□ -1.35
SDCBP-212ENST00000523483 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 TNFRSF18Q9Y5U5 241 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 RS1O15537 224 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms