RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MRPS16Q9Y3D3 137 aaKnown RBP8.49□□□□□ -1.05
CLK4-206ENST00000520878 JMJD8Q96S16 334 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
CLK4-206ENST00000520878 UNC79Q9P2D8 2635 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 IGHV3-16A0A0C4DH30 117 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 KLK9Q2XQG4 91 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 LURAP1LQ8IV03 231 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 TMEM89A2RUT3 159 aa8.48□□□□□ -1.05
CLK4-206ENST00000520878 CD28P10747 220 aa8.48□□□□□ -1.05
CLK4-206ENST00000520878 CCL24O00175 119 aa8.48□□□□□ -1.05
CLK4-206ENST00000520878 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
CLK4-206ENST00000520878 CYSLTR1Q9Y271 337 aa8.48□□□□□ -1.05
CLK4-206ENST00000520878 CRXO43186 299 aaPredicted RBP8.47□□□□□ -1.05
CLK4-206ENST00000520878 PPP1R17O96001 155 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 RPL35AP18077 110 aaKnown RBP8.47□□□□□ -1.05
CLK4-206ENST00000520878 TMEM170BQ5T4T1 132 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 OR4C5Q8NGB2 326 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 RASL10AQ92737 203 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 CHTOPQ9Y3Y2 248 aaKnown RBP8.47□□□□□ -1.05
CLK4-206ENST00000520878 TRGV11A0A075B6L2 103 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 COX8AP10176 69 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 SUMO4Q6EEV6 95 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 TP53TG1Q9Y2A0 90 aa8.47□□□□□ -1.05
CLK4-206ENST00000520878 NRACQ8N912 160 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 OR11H12B2RN74 326 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 PF4P02776 101 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 NPSP0C0P6 89 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 PLA2G2AP14555 144 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 OR11H2Q8NH07 326 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 SCRT2Q9NQ03 307 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 TNFRSF18Q9Y5U5 241 aa8.46□□□□□ -1.05
CLK4-206ENST00000520878 VCYO14598 125 aa8.46□□□□□ -1.06
CLK4-206ENST00000520878 BRI3O95415 125 aa8.46□□□□□ -1.06
CLK4-206ENST00000520878 CUBNO60494 3623 aa8.45□□□□□ -1.06
CLK4-206ENST00000520878 UBR5O95071 2799 aaPredicted RBP8.45□□□□□ -1.06
CLK4-206ENST00000520878 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
CLK4-206ENST00000520878 KLLNB2CW77 178 aa8.45□□□□□ -1.06
CLK4-206ENST00000520878 ZNF575Q86XF7 245 aa8.45□□□□□ -1.06
CLK4-206ENST00000520878 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
CLK4-206ENST00000520878 DLEU1O43261 78 aa8.45□□□□□ -1.06
CLK4-206ENST00000520878 DGAT2L7PQ6IED9 249 aa8.45□□□□□ -1.06
CLK4-206ENST00000520878 PHLDA1Q8WV24 401 aaPredicted RBP8.45□□□□□ -1.06
CLK4-206ENST00000520878 GCN1Q92616 2671 aaKnown RBP8.44□□□□□ -1.06
CLK4-206ENST00000520878 LGALS9O00182 355 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 C4orf3Q8WVX3 66 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 HIST1H4GQ99525 98 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 MRPL16Q9NX20 251 aaKnown RBP8.44□□□□□ -1.06
CLK4-206ENST00000520878 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLK4-206ENST00000520878 ODF1Q14990 250 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 TRGV1A0A0A0MS02 117 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 A6NDN8 102 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 RIPPLY3P57055 190 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 C20orf78Q9BR46 151 aa8.44□□□□□ -1.06
CLK4-206ENST00000520878 IGHV3-38A0A0C4DH36 116 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 H7C1H1 209 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 K7EMI3 77 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 ESM1Q9NQ30 184 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 P0DMU3 169 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 FAM231AP0DMU4 169 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 FAM231CP0DMU5 169 aa8.43□□□□□ -1.06
CLK4-206ENST00000520878 H3BMM0 161 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 DEFB114Q30KQ6 69 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 MAP6D1Q9H9H5 199 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 INSP01308 110 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 PROK1P58294 105 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 ORAOV1Q8WV07 137 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 ZNF580Q9UK33 172 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 H3BUT2 72 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 AMMECR1LQ6DCA0 310 aa8.42□□□□□ -1.06
CLK4-206ENST00000520878 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 FSHBP01225 129 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
CLK4-206ENST00000520878 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
CLK4-206ENST00000520878 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 A0A087WX48 190 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 HERVK_113P61574 105 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 ADAMTSL5Q6ZMM2 481 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 LINC01006Q8NI28 216 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 NHP2Q9NX24 153 aaKnown RBP8.41□□□□□ -1.06
CLK4-206ENST00000520878 ZFHX3Q15911 3703 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 F8VRH5 84 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
CLK4-206ENST00000520878 TSSC4Q9Y5U2 329 aaPredicted RBP8.41□□□□□ -1.06
CLK4-206ENST00000520878 COX11Q9Y6N1 276 aa8.41□□□□□ -1.06
CLK4-206ENST00000520878 HLA-DRB4P13762 266 aa8.4□□□□□ -1.06
CLK4-206ENST00000520878 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
CLK4-206ENST00000520878 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
CLK4-206ENST00000520878 HLA-DRB4X5D2U9 266 aa8.4□□□□□ -1.06
CLK4-206ENST00000520878 TRPT1Q86TN4 253 aaKnown RBP8.4□□□□□ -1.06
CLK4-206ENST00000520878 VCX2Q9H322 139 aa8.4□□□□□ -1.06
CLK4-206ENST00000520878 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.07
CLK4-206ENST00000520878 PLNP26678 52 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms